HHsearch alignment for GI: 254781020 and conserved domain: PRK13126
>PRK13126 consensus.
Probab=97.91 E-value=0.00082 Score=40.82 Aligned_cols=121 Identities=11% Similarity=0.080 Sum_probs=79.0
Q ss_pred HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 99987399717850478668899999997699799945888865100123102344323244310634688999998522
Q gi|254781020|r 177 LLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYC 256 (337)
Q Consensus 177 ~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~ 256 (337)
T Consensus 117 ~~~~~~gl~~I~-lv~ptt~~~ri~~i~~~s~gfiYvs~~gvTG~-~~~-----------------~~~~~~i~~ir~~~ 177 (237)
T PRK13126 117 ELSREYGLAPSF-FIPSKFPHRLLRRLASLEPDFIYLGLYAATGI-ELP-----------------VYVERNVKTIRGLA 177 (237)
T ss_pred HHHHHCCCCEEE-EECCCCHHHHHHHHHHHCCCEEEEEEECCCCC-CCH-----------------HHHHHHHHHHHHHC
T ss_conf 999976997799-73899839999999985898799986526676-415-----------------67999999999857
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8987997298888899999998388852334799998414668999999999999999999808
Q gi|254781020|r 257 NEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKPAMDSSDAVVAAIESLRKEFIVSMFLLG 320 (337)
Q Consensus 257 ~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el~~~m~~~G 320 (337)
T Consensus 178 ~~~Pv~vGFGI~t~e~~~~~~~~~aDGvIVGSaiV~~i~~~~~~~~~~v----~~lr~al~el~ 237 (237)
T PRK13126 178 GDVYLVAGFAIDSPEKAARLVKAGADGVVVGTAFMRRLSSSVEEALSFL----KEIRGALSELG 237 (237)
T ss_pred CCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC
T ss_conf 8997799945399999999986489999987899999997559999999----99999998559