HHsearch alignment for GI: 254781020 and conserved domain: PRK13140
>PRK13140 consensus.
Probab=97.32 E-value=0.01 Score=34.34 Aligned_cols=160 Identities=13% Similarity=0.065 Sum_probs=92.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 75212367998999987765089857625320356652068852430799999999873997178504786688999999
Q gi|254781020|r 124 GAVQLNYDFGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELG 203 (337)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a 203 (337)
T Consensus 97 ~Y~N~i~~~G~e~F~~~~~~~GvdGlIi-pDLP~ee-----------~~~~~~~~~~~~~i~~I~l-vaPtt~~~Ri~~i 163 (257)
T PRK13140 97 GYLNPIMQYGFEKFCKKCAETGIDGVII-PDLPFDD-----------YQEHYKEIFEKYGLKNIML-ITPQTSEERIREI 163 (257)
T ss_pred ECHHHHHHHCHHHHHHHHHHCCCCEEEE-CCCCHHH-----------HHHHHHHHHHHCCCCEEEE-ECCCCCHHHHHHH
T ss_conf 0559998517999999999849986983-5998567-----------5899999999869977998-6899989999999
Q ss_pred HHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCE
Q ss_conf 97699799945888865100123102344323244310634688999998522898799729888889999999838885
Q gi|254781020|r 204 LKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASL 283 (337)
Q Consensus 204 ~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAda 283 (337)
T Consensus 164 ~~~a~gFiY~vs~~GvTG~~~~~---------------~~~~~~~i~~ik~~~~~~Pv~vGFGIs~~e~v-~~~~~~aDG 227 (257)
T PRK13140 164 DSHTDGFIYMVSSASTTGAQQDF---------------NNQKRAYFKRIKDMNLKNPRMVGFGISNKATF-NAACEYASG 227 (257)
T ss_pred HHHCCCCEEECCCCCCCCCCCCC---------------CHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH-HHHHHCCCE
T ss_conf 97399966870365666887665---------------15689999999982789986998057989999-999831999
Q ss_pred EHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 233479999841466899999999999999
Q gi|254781020|r 284 GGLASPFLKPAMDSSDAVVAAIESLRKEFI 313 (337)
Q Consensus 284 V~iGr~~l~~~~~G~~gv~~~l~~l~~el~ 313 (337)
T Consensus 228 vIVGSaivk~i~e~~~~~~-~v~~fv~~lk 256 (257)
T PRK13140 228 AIIGSAFVKLLKEEKNPEK-AILKFVKEIK 256 (257)
T ss_pred EEECHHHHHHHHHCCCHHH-HHHHHHHHHC
T ss_conf 9987999999987798789-9999999962