HHsearch alignment for GI: 254781020 and conserved domain: PRK13523
>PRK13523 NADPH dehydrogenase NamA; Provisional.
Probab=98.78 E-value=4.3e-07 Score=60.11 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=92.7
Q ss_pred HHHHHHCCCEEEECCCCHHHH---HH----HCCCCC-------HHHHHHHHHHHHHHCCCCEEEEECCC-----CCCH--
Q ss_conf 877650898576253203566---52----068852-------43079999999987399717850478-----6688--
Q gi|254781020|r 139 QAVHVLGADGLFLHLNPLQEI---IQ----PNGNTN-------FADLSSKIALLSSAMDVPLLLKEVGC-----GLSS-- 197 (337)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~-------~~~~~~~i~~l~~~~~~pii~k~v~~-----~~~~-- 197 (337)
T Consensus 149 ~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~YGGs~eNR~Rf~lEii~aVr~~~~~~v~vRis~~d~~~gG~~~~d 228 (337)
T PRK13523 149 KRAKEAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDAVKEVWDGPLFVRISASDYHPDGLTVQD 228 (337)
T ss_pred HHHHHCCCCEEEEECCCCHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH
T ss_conf 99998499989981354358998479232489585588889998899999999998658863999336555789989899
Q ss_pred --HHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH
Q ss_conf --999999976997999458888651001231023443232443106346889999985228987997298888899999
Q gi|254781020|r 198 --MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILK 275 (337)
Q Consensus 198 --~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~k 275 (337)
T Consensus 229 ~~~~~~~l~~~GvD~i~vs~G~~~~-~------~~~~~-----~g~~~~~a---~~ik~~-~~ipvi~vG~i~~~~~ae~ 292 (337)
T PRK13523 229 YVQYAKWMKEQGVDLIDVSSGAVVP-A------RIDVY-----PGYQVPFA---EHIKEH-ANIATGAVGLITTGAQAEE 292 (337)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCC-C------CCCCC-----CCCCHHHH---HHHHHH-CCCCEEEECCCCCHHHHHH
T ss_conf 9999999997499989957885547-7------67778-----75334899---999987-6970999838699999999
Q ss_pred HHHHC-CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99838-88523347999984146689999999999999
Q gi|254781020|r 276 SIILG-ASLGGLASPFLKPAMDSSDAVVAAIESLRKEF 312 (337)
Q Consensus 276 AlalG-AdaV~iGr~~l~~~~~G~~gv~~~l~~l~~el 312 (337)
T Consensus 293 ~l~~G~aD~V~~gR~~ia----dPd~p~kaa~~~~~ei 326 (337)
T PRK13523 293 ILNNNRADLIFIGRELLR----NPYFPRIAANELGFEI 326 (337)
T ss_pred HHHCCCCCHHHHHHHHHH----CCCHHHHHHHHCCCCC
T ss_conf 998799479998999998----9109999997669999