HHsearch alignment for GI: 254781020 and conserved domain: TIGR00007
>TIGR00007 TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro: IPR006063 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (5.3.1.16 from EC), also known as Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase or HisA, catalyses the fourth step in histidine biosynthesis. HisA from Lactococcus lactis was found to be inactive . The putative HisA from Thermotoga maritima, is a conspicuous outlier to the set of all other HisA, including experimental HisA from the bacterium E. coli and the Archaeaon Methanococcus voltae. Neighbor joining shows HisA from Thermotoga maritima to be within the HisA family (with HisF as an outgroup) but with a long branch. ; GO: 0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity, 0000105 histidine biosynthetic process.
Probab=97.08 E-value=0.0044 Score=36.50 Aligned_cols=80 Identities=15% Similarity=-0.053 Sum_probs=54.2
Q ss_pred CCCCCHHHHHHHHHCC-CCEEEECC--CCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 7866889999999769-97999458--88865100123102344323244310634688999998522898799729888
Q gi|254781020|r 192 GCGLSSMDIELGLKSG-IRYFDIAG--RGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLR 268 (337)
Q Consensus 192 ~~~~~~~~~~~a~~aG-ad~i~v~~--~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr 268 (337)
T Consensus 149 s~~~~~~~~~~~~~~G~~~~ii~TdI~~DGt------------------l~G~---n~~~~~~~~~~~~~~~viaSGGv~ 207 (241)
T TIGR00007 149 SEVSLEELAKRLEELGELEGIIYTDISRDGT------------------LSGP---NFELTKELVKALVNVPVIASGGVS 207 (241)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEEEECCCC------------------EECC---CCCHHHHHHHHHCCCEEEEECCCC
T ss_conf 5627999999985158633689975200672------------------0078---732889999873584189942657
Q ss_pred CHHHHHHHHH--HCCCEEHHHHHHHH
Q ss_conf 8899999998--38885233479999
Q gi|254781020|r 269 NGVDILKSII--LGASLGGLASPFLK 292 (337)
Q Consensus 269 ~g~Dv~kAla--lGAdaV~iGr~~l~ 292 (337)
T Consensus 208 s~~D~~~L~~~~~G~~GvIvGkALY~ 233 (241)
T TIGR00007 208 SIDDLRALKEIELGVYGVIVGKALYE 233 (241)
T ss_pred CHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 88999999971598327998621116