HHsearch alignment for GI: 254781020 and conserved domain: TIGR00419
>TIGR00419 tim triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase () (TIM) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism . The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder .; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process.
Probab=91.74 E-value=0.069 Score=29.48 Aligned_cols=41 Identities=27% Similarity=0.276 Sum_probs=36.6
Q ss_pred HHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHH
Q ss_conf 85228987997298888899999998388852334799998
Q gi|254781020|r 253 RPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 (337)
Q Consensus 253 ~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~ 293 (337)
T Consensus 203 ~evn~~V~vlcGagi~~~~d~~~A~~lg~eGvLlasg~~KA 243 (244)
T TIGR00419 203 KEVNESVRVLCGAGITTGEDAELAAQLGAEGVLLASGVLKA 243 (244)
T ss_pred CCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCEEECC
T ss_conf 01266407887686165889999736997768872556437