HHsearch alignment for GI: 254781020 and conserved domain: cd00331
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water. IGPS is active as a separate monomer in most organisms, but is also found fused to other enzymes as part of a bifunctional or multifunctional enzyme involved in tryptophan biosynthesis.
Probab=98.22 E-value=0.00011 Score=45.98 Aligned_cols=126 Identities=15% Similarity=0.230 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 99899998776508985762532035665206885243079999999987399717850478668899999997699799
Q gi|254781020|r 132 FGVQKAHQAVHVLGADGLFLHLNPLQEIIQPNGNTNFADLSSKIALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYF 211 (337)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i 211 (337)
T Consensus 82 id~~QI~ea~-~~GAdaiLLI~~~L~~-----------~~l~~l~~~a~~lgl~~LvE----vh~~~El~~a~~~~a~iI 145 (217)
T cd00331 82 IDPYQIYEAR-AAGADAVLLIVAALDD-----------EQLKELYELARELGMEVLVE----VHDEEELERALALGAKII 145 (217)
T ss_pred CCHHHHHHHH-HCCCCCHHHHHHHCCH-----------HHHHHHHHHHHHHCCEEEEE----ECCHHHHHHHHHCCCCEE
T ss_conf 7699999999-8199878798885499-----------99999999999949827988----589999999995799878
Q ss_pred EECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHH
Q ss_conf 94588886510012310234432324431063468899999852289879972988888999999983888523347999
Q gi|254781020|r 212 DIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFL 291 (337)
Q Consensus 212 ~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l 291 (337)
T Consensus 146 GINnRdL~t~~------------------vd~~~~~~L~~--~ip~~~~~IsESGI~~~~di~~l~~~G~d~~LIG~sLm 205 (217)
T cd00331 146 GINNRDLKTFE------------------VDLNTTERLAP--LIPKDVILVSESGISTPEDVKRLAEAGADAVLIGESLM 205 (217)
T ss_pred EECCCCCHHCE------------------ECHHHHHHHHH--HCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHH
T ss_conf 42167712303------------------47899999996--48989889982799999999999987999999897886
Q ss_pred HH
Q ss_conf 98
Q gi|254781020|r 292 KP 293 (337)
Q Consensus 292 ~~ 293 (337)
T Consensus 206 ~~ 207 (217)
T cd00331 206 RA 207 (217)
T ss_pred CC
T ss_conf 79