HHsearch alignment for GI: 254781020 and conserved domain: cd00564
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=95.14 E-value=0.2 Score=26.70 Aligned_cols=100 Identities=16% Similarity=0.104 Sum_probs=61.5
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999873997178504786688999999976997999458888651001231023443232443106346889999985
Q gi|254781020|r 175 IALLSSAMDVPLLLKEVGCGLSSMDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARP 254 (337)
Q Consensus 175 i~~l~~~~~~pii~k~v~~~~~~~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~ 254 (337)
T Consensus 85 ~~~~r~~~~~~~ii-G~S~-h~~~e~~~a~~~g~DYi~~gpvf~T~t------K~~~~------~~~g~---~~l~~~~~ 147 (196)
T cd00564 85 VAEARALLGPDLII-GVST-HSLEEALRAEELGADYVGFGPVFPTPT------KPGAG------PPLGL---ELLREIAE 147 (196)
T ss_pred HHHHHHHHCCCCEE-EECC-CCHHHHHHHHHHCCCEEEECCCCCCCC------CCCCC------CCCCH---HHHHHHHH
T ss_conf 99999872889758-8247-889999998870999388646557898------88877------87788---99999998
Q ss_pred HCCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHH
Q ss_conf 228987997298888899999998388852334799998
Q gi|254781020|r 255 YCNEAQFIASGGLRNGVDILKSIILGASLGGLASPFLKP 293 (337)
Q Consensus 255 ~~~~v~IiadGGIr~g~Dv~kAlalGAdaV~iGr~~l~~ 293 (337)
T Consensus 148 -~~~~Pv~AiGGI-~~~ni~~~~~~G~~giAv~s~i~~~ 184 (196)
T cd00564 148 -LVEIPVVAIGGI-TPENAAEVLAAGADGVAVISAITGA 184 (196)
T ss_pred -HCCCCEEEECCC-CHHHHHHHHHCCCCEEEEHHHHHCC
T ss_conf -679998998589-9999999998099999972997779