HHsearch alignment for GI: 254781020 and conserved domain: cd02803
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=98.61 E-value=3.9e-06 Score=54.52 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=85.7
Q ss_pred HHHHHHCCCEEEECCCCHHH---HHHH-CCCC---C-------HHHHHHHHHHHHHHCCC--CEEEEECC-----CCCCH
Q ss_conf 87765089857625320356---6520-6885---2-------43079999999987399--71785047-----86688
Q gi|254781020|r 139 QAVHVLGADGLFLHLNPLQE---IIQP-NGNT---N-------FADLSSKIALLSSAMDV--PLLLKEVG-----CGLSS 197 (337)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~---~-------~~~~~~~i~~l~~~~~~--pii~k~v~-----~~~~~ 197 (337)
T Consensus 148 ~~A~~AGfDgVEIh~ahGyLl~qFlSp~~N~RtD~YGGs~eNR~Rf~~eii~air~~vg~df~vgvRls~~d~~~~g~~~ 227 (327)
T cd02803 148 RRAKEAGFDGVEIHGAHGYLLSQFLSPYTNKRTDEYGGSLENRARFLLEIVAAVREAVGPDFPVGVRLSADDFVPGGLTL 227 (327)
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCCH
T ss_conf 99998499989983576618887217546987777888989998999999999999739887617997702126899998
Q ss_pred ----HHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHH
Q ss_conf ----9999999769979994588886510012310234432324431063468899999852289879972988888999
Q gi|254781020|r 198 ----MDIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCNEAQFIASGGLRNGVDI 273 (337)
Q Consensus 198 ----~~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~~v~IiadGGIr~g~Dv 273 (337)
T Consensus 228 ~e~~~~~~~l~~~gvd~i~vs~g~~~~~~~-----~~~~----~~~~~~~-~~~~~~~ik~~-~~~pvi~~G~i~~~~~a 296 (327)
T cd02803 228 EEAIEIAKALEEAGVDALHVSGGSYESPPP-----IIPP----PYVPEGY-FLELAEKIKKA-VKIPVIAVGGIRDPEVA 296 (327)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCC-----CCCC----CCCCCCC-CHHHHHHHHHH-CCCCEEEECCCCCHHHH
T ss_conf 999999999985599989977784566754-----4678----7777522-38999999997-69819998998999999
Q ss_pred HHHHHHC-CCEEHHHHHHHH
Q ss_conf 9999838-885233479999
Q gi|254781020|r 274 LKSIILG-ASLGGLASPFLK 292 (337)
Q Consensus 274 ~kAlalG-AdaV~iGr~~l~ 292 (337)
T Consensus 297 ~~~l~~g~~D~V~~gR~~ia 316 (327)
T cd02803 297 EEILAEGKADLVALGRALLA 316 (327)
T ss_pred HHHHHCCCCCHHHHHHHHHH
T ss_conf 99998899312586699997