HHsearch alignment for GI: 254781020 and conserved domain: cd02931
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.
Probab=98.53 E-value=7e-06 Score=52.98 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=84.5
Q ss_pred HHHHHHHCCCEEEECCCC-HH---HHHHH-CC---CCC-------HHHHHHHHHHHHHHCC--CCEEEEECCC-------
Q ss_conf 987765089857625320-35---66520-68---852-------4307999999998739--9717850478-------
Q gi|254781020|r 138 HQAVHVLGADGLFLHLNP-LQ---EIIQP-NG---NTN-------FADLSSKIALLSSAMD--VPLLLKEVGC------- 193 (337)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~-~~---~~~~~-~~---~~~-------~~~~~~~i~~l~~~~~--~pii~k~v~~------- 193 (337)
T Consensus 156 A~rA~~AGfDgVEIH~ah~GyLl~qFlSp~~N~RtDeYGGSlenR~Rf~~Evi~aVR~~vg~d~~v~~R~s~~~~~~~~~ 235 (382)
T cd02931 156 AVIAKEAGFDGVEIHAVHEGYLLDQFTISLFNKRTDKYGGSLENRLRFAIEIVEEIKARCGEDFPVSLRYSVKSYIKDLR 235 (382)
T ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 99999849998996245303589985487358988645898788561899999999997098873899965633456654
Q ss_pred ------------CCCHH----HHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf ------------66889----99999976997999458888651001231023443232443106346889999985228
Q gi|254781020|r 194 ------------GLSSM----DIELGLKSGIRYFDIAGRGGTSWSRIESHRDLESDIGIVFQDWGIPTPLSLEMARPYCN 257 (337)
Q Consensus 194 ------------~~~~~----~~~~a~~aGad~i~v~~~gG~~~~~~~~~r~~~~~~~~~~~~~gi~~~~al~~~~~~~~ 257 (337)
T Consensus 236 ~g~~~~~~~~~~g~~l~e~~~~~~~l~~~G~D~l~vs~g~~~~~---~~-----~~~-~~~~~~g~~~-~~a~~ik~-~~ 304 (382)
T cd02931 236 QGALPGEEFQEKGRDLEEGLKAAKILEEAGYDALDVDAGSYDAW---YW-----NHP-PMYQKKGMYL-PYCKALKE-VV 304 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCH---HC-----CCC-CCCCCCCCCH-HHHHHHHH-HC
T ss_conf 57885777888763599999999999983988896477742110---10-----379-7546763148-99999998-73
Q ss_pred CCEEEECCCCCCHHHHHHHHHHC-CCEEHHHHHHHH
Q ss_conf 98799729888889999999838-885233479999
Q gi|254781020|r 258 EAQFIASGGLRNGVDILKSIILG-ASLGGLASPFLK 292 (337)
Q Consensus 258 ~v~IiadGGIr~g~Dv~kAlalG-AdaV~iGr~~l~ 292 (337)
T Consensus 305 ~iPvi~~G~i~~p~~ae~~l~~g~aD~V~~gR~~ia 340 (382)
T cd02931 305 DVPVIMAGRMEDPELASEAINEGIADMISLGRPLLA 340 (382)
T ss_pred CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 998899689699999999998699654362289886