HHsearch alignment for GI: 254781024 and conserved domain: CHL00014
>CHL00014 ndhI NADH dehydrogenase subunit I.
Probab=94.64 E-value=0.029 Score=34.67 Aligned_cols=58 Identities=24% Similarity=0.351 Sum_probs=42.9
Q ss_pred CCCHHCCHHHHCCHHHCCCCCEEEEEEE--CCC-C----EEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 5440017354178132135860068896--599-7----05665156667047573006888862536798
Q gi|254781024|r 482 DLQKKSELRIYSGPSMRYCPAGVYEWHQ--NND-E----NNYIIHAQNCIHCKACVIKDPNQNIEWNPPQG 545 (554)
Q Consensus 482 ~~~~~~~~~~~~~p~~~~cpa~vye~~~--~~~-~----~~~~i~~~nc~hcktc~ik~p~~~i~w~~p~g 545 (554)
T Consensus 62 dkCI~C------~~C~~vCP~~~i~Vd~~~~~~~~kK~~~~y~ID~grCIFCG~CvEaCPtdAI~mT~EyE 126 (173)
T CHL00014 62 DKCIAC------EVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYE 126 (173)
T ss_pred CCCCCH------HHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 117244------36986597776163355678888501146775616213036711017868033567554