HHsearch alignment for GI: 254781024 and conserved domain: COG1146
>COG1146 Ferredoxin [Energy production and conversion].
Probab=95.59 E-value=0.011 Score=37.68 Aligned_cols=54 Identities=24% Similarity=0.589 Sum_probs=43.5
Q ss_pred CCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 781321358600688965997056651566670475730068888625367988
Q gi|254781024|r 493 SGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEWNPPQGG 546 (554)
Q Consensus 493 ~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~p~gg 546 (554)
T Consensus 13 c~~C~~~CP~~~~~~~~~~~~~~~~~~~e~C~~C~~C~~~CP~~aI~~~~~~~~ 66 (68)
T COG1146 13 CGICVEVCPAGVFDLGEDEGGKPVVARPEECIDCGLCELACPVGAIKVDILRPG 66 (68)
T ss_pred CCEEEEECCCCCEECCCCCCCCEEEECHHHCCCCCCHHHHCCCCEEEEECCCCC
T ss_conf 984277288760883222577168876466865561344488677997335567