HHsearch alignment for GI: 254781024 and conserved domain: COG1245

Probab=94.74  E-value=0.033  Score=34.22  Aligned_cols=106  Identities=16%  Similarity=0.166  Sum_probs=50.5

Q ss_pred             HHHHCCCHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----
Q ss_conf             9860800456503882630351340054212487423088799612323313664352268999999999999998----
Q gi|254781024|r  284 RFKTHPDIRIIFTEGERLEYGARVISEGGWQSVPKLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVER----  359 (554)
Q Consensus       284 ~fk~hp~i~~~l~gg~~~~yga~~ip~gg~~s~pk~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~ea----  359 (554)
T Consensus       327 ~F~~~~~~~~~~~-~~lv~y~~~~k~~g~F~L---~V~~G~i~~gEvigilGp---NgiGKTTFvk~LAG~ikPdeg~~~  399 (591)
T COG1245         327 EFEEKPPRDDKAR-DTLVEYPDLKKTYGDFKL---EVEEGEIYDGEVIGILGP---NGIGKTTFVKLLAGVIKPDEGSEE  399 (591)
T ss_pred             EEECCCCCCCCCC-CEEEECCHHEEECCCEEE---EECCCEEECCEEEEEECC---CCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf             4414686443100-306621002010376589---953874633548999888---875467799998566257878876


Q ss_pred             ----------H---HCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----------7---45886530367-8998642046678887422566887
Q gi|254781024|r  360 ----------L---SNGKKHDDPIE-IEDSWRQTQIGKDLWIIRNIKPLLS  396 (554)
Q Consensus       360 ----------l---~~g~~~~~l~~-Ye~~~~~s~~~~el~~~rn~~~~~~  396 (554)
T Consensus       400 ~~~vSyKPQyI~~~~~gtV~~~l~~~~~~~~~~s~~~~ei~~pl~l~~i~e  450 (591)
T COG1245         400 DLKVSYKPQYISPDYDGTVEDLLRSAIRSAFGSSYFKTEIVKPLNLEDLLE  450 (591)
T ss_pred             CCEEECCCEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHH
T ss_conf             514750553403789982999998743000145056776407446477874