HHsearch alignment for GI: 254781024 and conserved domain: COG2440

>COG2440 FixX Ferredoxin-like protein [Energy production and conversion].
Probab=99.32  E-value=8.7e-13  Score=107.77  Aligned_cols=89  Identities=29%  Similarity=0.660  Sum_probs=73.9

Q ss_pred             CCCCCHHCCCCCCCCCCCCEEEEECCCCCHHCCHHHHCCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             12321110378899888621796175544001735417813213586006889659970566515666704757300688
Q gi|254781024|r  456 DIMSSLFLAKVKYVKEQPMHLLIKDKDLQKKSELRIYSGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPN  535 (554)
Q Consensus       456 d~~~~v~~s~~~h~~~qp~Hl~~~~~~~~~~~~~~~~~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~  535 (554)
T Consensus         8 ~iE~kL~~n~~~vDe~~p-HI~v~d~~~~~~~~----~~~l~~aCPA~~Y~~---~~~g~l~~~yegClECGTCRvlc~~   79 (99)
T COG2440           8 NIEEKLSVNRYNVDEDHP-HIIVKDPDDCQECE----DKPLIKACPAGCYKL---IDDGKLRFDYEGCLECGTCRVLCPH   79 (99)
T ss_pred             EHHHHHHHHEEECCCCCC-CEECCCCHHHHHCC----CHHHHHCCCHHHEEE---CCCCCEEEEECCEEECCCEEEECCC
T ss_conf             276842113153158997-47438802410133----114665398878068---7998689964680014632585178


Q ss_pred             -CCCEEECCCCCCCCCCC
Q ss_conf             -88625367988879988
Q gi|254781024|r  536 -QNIEWNPPQGGDGPHYV  552 (554)
Q Consensus       536 -~~i~w~~p~gg~gp~y~  552 (554)
T Consensus        80 ~~~i~W~YPrgg~GI~yr   97 (99)
T COG2440          80 SGLIQWRYPRGGFGITYR   97 (99)
T ss_pred             CCCEEEECCCCCCCEEEE
T ss_conf             752587558988677884