HHsearch alignment for GI: 254781024 and conserved domain: COG2440
>COG2440 FixX Ferredoxin-like protein [Energy production and conversion].
Probab=99.32 E-value=8.7e-13 Score=107.77 Aligned_cols=89 Identities=29% Similarity=0.660 Sum_probs=73.9
Q ss_pred CCCCCHHCCCCCCCCCCCCEEEEECCCCCHHCCHHHHCCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 12321110378899888621796175544001735417813213586006889659970566515666704757300688
Q gi|254781024|r 456 DIMSSLFLAKVKYVKEQPMHLLIKDKDLQKKSELRIYSGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPN 535 (554)
Q Consensus 456 d~~~~v~~s~~~h~~~qp~Hl~~~~~~~~~~~~~~~~~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~ 535 (554)
T Consensus 8 ~iE~kL~~n~~~vDe~~p-HI~v~d~~~~~~~~----~~~l~~aCPA~~Y~~---~~~g~l~~~yegClECGTCRvlc~~ 79 (99)
T COG2440 8 NIEEKLSVNRYNVDEDHP-HIIVKDPDDCQECE----DKPLIKACPAGCYKL---IDDGKLRFDYEGCLECGTCRVLCPH 79 (99)
T ss_pred EHHHHHHHHEEECCCCCC-CEECCCCHHHHHCC----CHHHHHCCCHHHEEE---CCCCCEEEEECCEEECCCEEEECCC
T ss_conf 276842113153158997-47438802410133----114665398878068---7998689964680014632585178
Q ss_pred -CCCEEECCCCCCCCCCC
Q ss_conf -88625367988879988
Q gi|254781024|r 536 -QNIEWNPPQGGDGPHYV 552 (554)
Q Consensus 536 -~~i~w~~p~gg~gp~y~ 552 (554)
T Consensus 80 ~~~i~W~YPrgg~GI~yr 97 (99)
T COG2440 80 SGLIQWRYPRGGFGITYR 97 (99)
T ss_pred CCCEEEECCCCCCCEEEE
T ss_conf 752587558988677884