HHsearch alignment for GI: 254781024 and conserved domain: COG4529
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.02 E-value=7.6e-05 Score=52.56 Aligned_cols=150 Identities=15% Similarity=0.188 Sum_probs=77.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCC-EEEEEECCCCCCCCCCCCCEECHHHHH-------HHCCCHHHHCCCCCCCEEE
Q ss_conf 47799989768999999999808997-399997867789864027403336788-------8678726414885432243
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHL-SVVILEKSAEVGAHILSGAIIDPIGID-------SLLPRWREDKGHPFHTVVK 86 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l-~VlvlEK~~~pG~~i~sG~vl~p~aL~-------eL~Pd~~e~~g~pl~~~v~ 86 (554)
T Consensus 2 ~~VAIIGgG~sGi~~A~~Ll~~~~~~~~Isi~e~~~~~G~GiaYs~~~p~~~lNv~a~~mS~~~pD~------------- 68 (474)
T COG4529 2 FKVAIIGGGFSGIYMAAHLLKSPRPSGLISIFEPRPNFGQGIAYSTEEPEHLLNVPAARMSAFAPDI------------- 68 (474)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC-------------
T ss_conf 5189978865799999999847887775678535554578755788882144216202354458998-------------
Q ss_pred EEEE-EEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC---CC---EECCCCEEEEEEECCCCCEEEEE
Q ss_conf 6699-99779976773654356544678826888889899999999874---95---33068224347762776201454
Q gi|254781024|r 87 RDLY-WFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEAL---GV---EIYCGFTATEIYYGKKGEALGIL 159 (554)
Q Consensus 87 ~d~~-~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~---Gv---ei~~g~~v~~i~~~e~g~vvgv~ 159 (554)
T Consensus 69 p~~F~~WL~~~----~~~~~d~~~~~~d~~~y~pR~lfG~Yl~e~l~~l~~~~~~~~v~~~~~~a~~~~~~~n~~~~~~~ 144 (474)
T COG4529 69 PQDFVRWLQKQ----LQRYRDPEDINHDGQAYPPRRLFGEYLREQLAALLARGRQTRVRTIREEATSVRQDTNAGGYLVT 144 (474)
T ss_pred CHHHHHHHHHC----CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEECCCCCEEEEE
T ss_conf 16899999742----55657754437765346615699999999999999736764046776444301004577357896
Q ss_pred ECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHH
Q ss_conf 1243244346657875630267742578606644325
Q gi|254781024|r 160 TGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSL 196 (554)
Q Consensus 160 t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~l 196 (554)
T Consensus 145 ~~~---------------g~~~~ad~~Vlatgh~~~~ 166 (474)
T COG4529 145 TAD---------------GPSEIADIIVLATGHSAPP 166 (474)
T ss_pred CCC---------------CCEEEEEEEEEECCCCCCC
T ss_conf 588---------------8704501799943688997