HHsearch alignment for GI: 254781024 and conserved domain: PRK05945

>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.76  E-value=9.1e-15  Score=121.53  Aligned_cols=162  Identities=25%  Similarity=0.364  Sum_probs=99.4

Q ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC--CCE---E---CH--------------------
Q ss_conf             0364779998976899999999980899739999786778986402--740---3---33--------------------
Q gi|254781024|r   12 VFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILS--GAI---I---DP--------------------   63 (554)
Q Consensus        12 ~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~s--G~v---l---~p--------------------   63 (554)
T Consensus         1 ~~e~DVLVIGsG~AGl~AA~~a~~~~~~~~V~lv~K~~~~~~~s~~a~gGi~a~~~~~~~~Ds~e~~~~Dt~k~g~~l~d   80 (575)
T PRK05945          1 MLEHDVVIVGGGLAGCRAALEIARLDPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPQDSWEAHAFDTVKGSDYLAD   80 (575)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             94089899996599999999999878998299997889999726888788998843799998999999999986468888


Q ss_pred             -HHHHHH---CC---CHHHHCCCCCCCEEEEEEEEEECCCCCEE---CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
Q ss_conf             -678886---78---72641488543224366999977997677---365435654467882688888989999999987
Q gi|254781024|r   64 -IGIDSL---LP---RWREDKGHPFHTVVKRDLYWFLNAQRSIQ---IPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEA  133 (554)
Q Consensus        64 -~aL~eL---~P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~---~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~  133 (554)
T Consensus        81 ~~lv~~l~~~~~~~v~~Le~~Gv~f~r~----------~dG~~~~~~~gGhs~~R~~~~~~---~tG~~i~~~L~~~~~~  147 (575)
T PRK05945         81 QDAVAILTQEAPDVIIDLEHLGVLFSRL----------PDGRIAQRAFGGHSHNRTCYAAD---KTGHAILHELVNNLRR  147 (575)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCC----------CCCCCCCEECCCCCCCCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf             9999999999999999999869977608----------89888011036710255545688---8399999999999854


Q ss_pred             CCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf             4953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r  134 LGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT  197 (554)
Q Consensus       134 ~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la  197 (554)
T Consensus       148 ~gv~i~~~~~v~~Ll~-~dg~v~Ga~~~~~---~~G-------~~~~i~AkaVVlATGG~~~~~  200 (575)
T PRK05945        148 YGVTIYDEWYVMRLIL-EENEAKGVVMYHI---ADG-------RLEVVRAKAVMFATGGYGRVF  200 (575)
T ss_pred             CCCEEEEEEEEEEEEE-ECCEEEEEEEEEC---CCC-------CEEEEECCEEEECCCCCCCCC
T ss_conf             6978994178888987-0997899999971---688-------389998998998999987788