HHsearch alignment for GI: 254781024 and conserved domain: PRK05945
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.76 E-value=9.1e-15 Score=121.53 Aligned_cols=162 Identities=25% Similarity=0.364 Sum_probs=99.4
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC--CCE---E---CH--------------------
Q ss_conf 0364779998976899999999980899739999786778986402--740---3---33--------------------
Q gi|254781024|r 12 VFEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILS--GAI---I---DP-------------------- 63 (554)
Q Consensus 12 ~meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~s--G~v---l---~p-------------------- 63 (554)
T Consensus 1 ~~e~DVLVIGsG~AGl~AA~~a~~~~~~~~V~lv~K~~~~~~~s~~a~gGi~a~~~~~~~~Ds~e~~~~Dt~k~g~~l~d 80 (575)
T PRK05945 1 MLEHDVVIVGGGLAGCRAALEIARLDPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPQDSWEAHAFDTVKGSDYLAD 80 (575)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 94089899996599999999999878998299997889999726888788998843799998999999999986468888
Q ss_pred -HHHHHH---CC---CHHHHCCCCCCCEEEEEEEEEECCCCCEE---CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
Q ss_conf -678886---78---72641488543224366999977997677---365435654467882688888989999999987
Q gi|254781024|r 64 -IGIDSL---LP---RWREDKGHPFHTVVKRDLYWFLNAQRSIQ---IPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEA 133 (554)
Q Consensus 64 -~aL~eL---~P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~---~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~ 133 (554)
T Consensus 81 ~~lv~~l~~~~~~~v~~Le~~Gv~f~r~----------~dG~~~~~~~gGhs~~R~~~~~~---~tG~~i~~~L~~~~~~ 147 (575)
T PRK05945 81 QDAVAILTQEAPDVIIDLEHLGVLFSRL----------PDGRIAQRAFGGHSHNRTCYAAD---KTGHAILHELVNNLRR 147 (575)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCC----------CCCCCCCEECCCCCCCCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf 9999999999999999999869977608----------89888011036710255545688---8399999999999854
Q ss_pred CCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 4953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 134 LGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 134 ~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 148 ~gv~i~~~~~v~~Ll~-~dg~v~Ga~~~~~---~~G-------~~~~i~AkaVVlATGG~~~~~ 200 (575)
T PRK05945 148 YGVTIYDEWYVMRLIL-EENEAKGVVMYHI---ADG-------RLEVVRAKAVMFATGGYGRVF 200 (575)
T ss_pred CCCEEEEEEEEEEEEE-ECCEEEEEEEEEC---CCC-------CEEEEECCEEEECCCCCCCCC
T ss_conf 6978994178888987-0997899999971---688-------389998998998999987788