HHsearch alignment for GI: 254781024 and conserved domain: PRK06069
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.72 E-value=4.7e-14 Score=116.55 Aligned_cols=163 Identities=23% Similarity=0.374 Sum_probs=98.3
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCCC--CC---EECH----HH-----HH--------
Q ss_conf 103647799989768999999999808-99739999786778986402--74---0333----67-----88--------
Q gi|254781024|r 11 DVFEYDVVIIGAGPAGLAAAIRCKQIN-PHLSVVILEKSAEVGAHILS--GA---IIDP----IG-----ID-------- 67 (554)
Q Consensus 11 e~meyDVvIVGaGPAG~saA~~La~~g-~~l~VlvlEK~~~pG~~i~s--G~---vl~p----~a-----L~-------- 67 (554)
T Consensus 2 ~~~~~DVlVIG~G~AGl~AA~~a~~~~~~~~~V~lv~K~~~~~s~s~~a~gG~~a~~~~~~~~Ds~~~~~~Dt~~~g~~l 81 (582)
T PRK06069 2 EVLKYDVVIVGSGLAGLRAAVAAARASGGKISIAVVSKTQAMRSHSVSAEGGTAAVLYPEKTGDSPELHAYDTVKGSDFL 81 (582)
T ss_pred CEEECCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 77870689999739999999999985389986999979899997089998779987178889999899999999853688
Q ss_pred -------HH---CC---CHHHHCCCCCCCEEEEEEEEEECCCCCEEC---CCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
Q ss_conf -------86---78---726414885432243669999779976773---654356544678826888889899999999
Q gi|254781024|r 68 -------SL---LP---RWREDKGHPFHTVVKRDLYWFLNAQRSIQI---PHFCLPDFMDNKEHYIVSLGQVCRWLKNKA 131 (554)
Q Consensus 68 -------eL---~P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~---p~~~~p~~~~~~g~yiv~r~~fd~~L~~~A 131 (554)
T Consensus 82 ~d~~lv~~l~~~a~~~v~~le~~Gv~f~r----------~~~G~~~~~~~gGhs~~R~~~~~d---~tG~~i~~~l~~~~ 148 (582)
T PRK06069 82 ADQDAVEVLVREAPEEIRFLDHWGVPWSR----------DPDGRISQRPFGGMSFPRTTFAAD---KTGFYIMSTLYSRA 148 (582)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEE----------CCCCCEEEEECCCCCCCEEECCCC---CCCHHHHHHHHHHH
T ss_conf 88999999999899999999976997106----------899988752158703450003678---75399999999999
Q ss_pred HH-CCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 87-4953306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 132 EA-LGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 132 e~-~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 149 ~~~~gv~~~~~~~vt~Ll~-~~g~v~Ga~~~d~~---~G-------~~~~i~AkaVVlATGG~g~l~ 204 (582)
T PRK06069 149 LRFDNIHFYHEHFVTSLIV-ENGVFKGVTAIDLR---RG-------EFKVFQAKAGIIATGGAGRLY 204 (582)
T ss_pred HHCCCCEEEEEEEEEEEEE-CCCEEEEEEEEECC---CC-------EEEEEEECEEEECCCCCCCCC
T ss_conf 8469948997789888874-39989999999768---98-------299998255998988675467