HHsearch alignment for GI: 254781024 and conserved domain: PRK06481
>PRK06481 fumarate reductase flavoprotein subunit; Validated.
Probab=99.78 E-value=1.9e-16 Score=133.22 Aligned_cols=158 Identities=23% Similarity=0.358 Sum_probs=99.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCEEC-H---------------HHHHHHC------
Q ss_conf 6477999897689999999998089973999978677898640-274033-3---------------6788867------
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL-SGAIID-P---------------IGIDSLL------ 70 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~-sG~vl~-p---------------~aL~eL~------ 70 (554)
T Consensus 60 ~yDVvVVG~G~AGl~AAi~Aae~G--a~VvllEK~~~~GG~s~~s~g~~~~~~t~~q~~~G~~ds~~~~~~d~~~~~~~~ 137 (506)
T PRK06481 60 KYDIVIVGAGGAGMTAAIEAKDAG--MNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGIADSNDKFYEETLKGGGGT 137 (506)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf 846799898899999999999889--978999689999951888558845269999997389999999999999734888
Q ss_pred ----------------CCHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHC
Q ss_conf ----------------8726414885432243669999779976773654356544678826888889899999999874
Q gi|254781024|r 71 ----------------PRWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEAL 134 (554)
Q Consensus 71 ----------------Pd~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~ 134 (554)
T Consensus 138 ~d~~l~~~~~~~s~~~idWl~~~G~~~~~~---------~~~g~~~~~~~~~~~~----g--~~~g~~lv~~l~~~~~~~ 202 (506)
T PRK06481 138 NDKALLRYFVDNSASAIDWLDSMGIKLDNL---------TITGGMSEKRTHRPHD----G--SAVGGYLVDGLLKNVQER 202 (506)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCC---------CCCCCCCCCEEEECCC----C--CHHHHHHHHHHHHHHHHC
T ss_conf 889999999983899999999759846667---------6678877670343488----7--647999999999999877
Q ss_pred CCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHH
Q ss_conf 953306822434776277620145412432443466578756302677425786066443255421
Q gi|254781024|r 135 GVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQL 200 (554)
Q Consensus 135 Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l 200 (554)
T Consensus 203 gv~i~~~t~~~~L~-~~dG~V~GV~~~~~~g-----------~~~~i~akaVILATGGf~~N~em~ 256 (506)
T PRK06481 203 KIPLFVNADVTKIT-EKDGKVTGVKVKINGK-----------ETKTISSKAVVVTTGGFGANKKMI 256 (506)
T ss_pred CCEEEECCEEEEEE-ECCCCEEEEEEEECCC-----------EEEEEECCEEEECCCCCCCCHHHH
T ss_conf 98799877832323-0589378999996898-----------499997356999778877679999