HHsearch alignment for GI: 254781024 and conserved domain: PRK07236
>PRK07236 hypothetical protein; Provisional.
Probab=99.88 E-value=7.9e-20 Score=156.70 Aligned_cols=329 Identities=15% Similarity=0.104 Sum_probs=160.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCC--CCEEEEEEEEE
Q ss_conf 4779998976899999999980899739999786778986402740333678886787264148854--32243669999
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPF--HTVVKRDLYWF 92 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl--~~~v~~d~~~~ 92 (554)
T Consensus 7 ~kV~IVGaGiaGL~~A~~L~~~G--~~v~v~Er~~~~~~~~G~gi~l~p~~~~~L-----~~~G~~~~~~~~~~~~~~~~ 79 (386)
T PRK07236 7 PRAVVVGGSLGGLFAANLLRRAG--WDVDVFERSPTELDGRGGGIVLQPELLRAL-----AFAGVELPADIGVPSRERIY 79 (386)
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCEEEEECCHHHHHHH-----HHCCCCCHHHCCCCCCCEEE
T ss_conf 96899993689999999998589--998998689986788604997298899999-----97699564751876564699
Q ss_pred ECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 77997677365435654467882688888989999999987495330682243477627762014541243244346657
Q gi|254781024|r 93 LNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQG 172 (554)
Q Consensus 93 l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~ 172 (554)
T Consensus 80 ~~~~g~~~~~~-~~-------~~~~~~~~~l~~~l~~~l--~~~~i~~g~~v~~v~~~~~~--v~v~~~----------- 136 (386)
T PRK07236 80 LDRDGRVVQRQ-PM-------PQTQTSWNVLYRALRAAL--PAEHYHAGEALERVEQDGDR--VTAHFA----------- 136 (386)
T ss_pred ECCCCCEEEEE-CC-------CCCCHHHHHHHHHHHHHC--CCCEEEECCEEEEEEEECCE--EEEEEC-----------
T ss_conf 94899788761-48-------730114999999999768--99889959999999982997--999987-----------
Q ss_pred CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHH-HHHH---HHHHHCCCCC---CC------CEEEEEE
Q ss_conf 87563026774257860664432554211224899888898998-8988---8875165667---88------8089950
Q gi|254781024|r 173 KHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFG-LGIK---ELWKIKPQYH---RR------GLALHSI 239 (554)
Q Consensus 173 ~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~-~gvk---e~~ei~~~~~---~~------G~~~h~~ 239 (554)
T Consensus 137 ----dG~~~~adlvVGADG~~S~vR~~l~~~~------~~~~~g~~~~rg~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (386)
T PRK07236 137 ----DGREETADLLIGADGGRSAVRAQLLPDV------RPTYAGYVAWRGLVDEAALPDEARAALRDRFAFQQGPGELIL 206 (386)
T ss_pred ----CCCEEEEEEEEECCCCCCCHHHHHCCCC------CCCCCCEEEEEEEEEHHHCCHHHHHHHCCCEEEEECCCCEEE
T ss_conf ----9988776289965887751588747899------974546589999953686886777752374279967996599
Q ss_pred CCCCCCCC-------CCCEEEE--ECCCCEEEEEEEECCCC--C----CCCCCHHHHHHHHHH------CCCHHHHHCCC
Q ss_conf 43476876-------6412576--64798059999832666--5----668898899999860------80045650388
Q gi|254781024|r 240 GWPLDMNT-------SGGGFVY--HFDDNLVSIGFVLHLDY--R----NPWISAYEELQRFKT------HPDIRIIFTEG 298 (554)
Q Consensus 240 g~~~~~~~-------~gggwiy--~~~d~~~~iG~v~~ld~--~----~~~~~~~~~lq~fk~------hp~i~~~l~gg 298 (554)
T Consensus 207 ~y~~~~~~~~~~~g~~~~~~vw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (386)
T PRK07236 207 GYLVPGEDGSTEPGQRRYNWVWYRPASAGEELPELLTDRDGTRRPGSLPPGALRDEVLAELRDAAARLLAPTFAELVDAT 286 (386)
T ss_pred EEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 99823788863445406889998226833555565412456501145784425788999999998754278999998638
Q ss_pred CEECCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 26303513400542124874230887996123233136643522689999999999999987458865303678998642
Q gi|254781024|r 299 ERLEYGARVISEGGWQSVPKLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKHDDPIEIEDSWRQ 378 (554)
Q Consensus 299 ~~~~yga~~ip~gg~~s~pk~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~~~l~~Ye~~~~~ 378 (554)
T Consensus 287 ~~~~----~~~i~~~~-~~~~~~gRv~LiGDAAH~m~P~~GQGan~AieDA~~La~~L~~~--~~~~~~al~~Ye~~R~p 359 (386)
T PRK07236 287 AQPF----VQAIFDLE-VPRMAFGRVALLGDAAFVARPHTAMGVAKAAGDAVALAEALAAA--ADDIDAALAAWEAERLA 359 (386)
T ss_pred CCCE----EEEEEECC-CCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHH
T ss_conf 7511----63413102-65345688899976517579851036899999999999999867--87799999999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 0466788874225
Q gi|254781024|r 379 TQIGKDLWIIRNI 391 (554)
Q Consensus 379 s~~~~el~~~rn~ 391 (554)
T Consensus 360 r-~~~v~~~sr~~ 371 (386)
T PRK07236 360 V-GAAIVARGRDL 371 (386)
T ss_pred H-HHHHHHHHHHH
T ss_conf 9-99999999999