HHsearch alignment for GI: 254781024 and conserved domain: PRK07573
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.21 E-value=1.5e-10 Score=92.18 Aligned_cols=163 Identities=18% Similarity=0.215 Sum_probs=93.9
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC-CCCCC--CCCE---EC------------------------H
Q ss_conf 64779998976899999999980899739999786778-98640--2740---33------------------------3
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEV-GAHIL--SGAI---ID------------------------P 63 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~p-G~~i~--sG~v---l~------------------------p 63 (554)
T Consensus 33 ~~DVlVIGsG~AGL~AAi~aa~~G--~~V~vl~~~~~~~~snS~~AqGGInAa~~~~~~~DS~e~H~~DTlkaG~gl~d~ 110 (638)
T PRK07573 33 KFDIIVVGTGLAGASAAATLGELG--YNVKVFCYQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRARE 110 (638)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCH
T ss_conf 488899996699999999999749--956999922899962088875556740468999989899999999862787749
Q ss_pred HHHHHHC---C---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCC--CCCEEEEHHHHHHHHHHHHHHCC
Q ss_conf 6788867---8---72641488543224366999977997677365435654467--88268888898999999998749
Q gi|254781024|r 64 IGIDSLL---P---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDN--KEHYIVSLGQVCRWLKNKAEALG 135 (554)
Q Consensus 64 ~aL~eL~---P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~--~g~yiv~r~~fd~~L~~~Ae~~G 135 (554)
T Consensus 111 ~~V~~l~~~ap~~I~~L~~~Gv~Fdr~~--~g~l~~~~~GGhS~~-----Ri~ha~d~TG~~i~~~-l~~~L~~~~~~~~ 182 (638)
T PRK07573 111 ANVYRLAEVSVNIIDQCVAQGVPFAREY--GGLLANRSFGGAQVS-----RTFYARGQTGQQLLLG-AYSALSRQIAAGT 182 (638)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCCC-----EEEECCCCCHHHHHHH-HHHHHHHHHHCCC
T ss_conf 9999999988999999997599875689--986604456676652-----4773289616899999-9999999873389
Q ss_pred CEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 53306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 136 VEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 136 vei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 183 I~~~~~~~~~dLi~-~dg~~~Gv~~~d~~~----------G~~~~~~AkaVILATGG~g~ly 233 (638)
T PRK07573 183 VELFTRTEMLDLVV-VDGRARGIVARNLVT----------GEIERHAADAVVLATGGYGNVF 233 (638)
T ss_pred CEEEECEEEEEEEE-ECCEEEEEEEEECCC----------CCEEEEECCEEEECCCCCCCCC
T ss_conf 88993579999899-899999999996589----------9489997167998578575121