HHsearch alignment for GI: 254781024 and conserved domain: PRK08222

Probab=95.37  E-value=0.013  Score=37.10  Aligned_cols=57  Identities=18%  Similarity=0.350  Sum_probs=44.9

Q ss_pred             CCCCCHHCCHHHHCCHHHCCCCCEEEEEEEC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf             7554400173541781321358600688965--99705665156667047573006888862536
Q gi|254781024|r  480 DKDLQKKSELRIYSGPSMRYCPAGVYEWHQN--NDENNYIIHAQNCIHCKACVIKDPNQNIEWNP  542 (554)
Q Consensus       480 ~~~~~~~~~~~~~~~p~~~~cpa~vye~~~~--~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~  542 (554)
T Consensus        36 d~ekCIgC------~~C~~~CP~~AI~~~~d~~~~~r~~~id~grCIfCG~C~EvCPt~AI~lt~   94 (181)
T PRK08222         36 MPSQCIAC------GACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN   94 (181)
T ss_pred             CHHHCCCH------HHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCC
T ss_conf             81018453------289875860266876226788568885266167877244148814206776