HHsearch alignment for GI: 254781024 and conserved domain: PRK09898

Probab=96.15  E-value=0.0042  Score=40.45  Aligned_cols=50  Identities=26%  Similarity=0.561  Sum_probs=41.9

Q ss_pred             CCHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf             7813213586006889659970566515666704757300688886253679
Q gi|254781024|r  493 SGPSMRYCPAGVYEWHQNNDENNYIIHAQNCIHCKACVIKDPNQNIEWNPPQ  544 (554)
Q Consensus       493 ~~p~~~~cpa~vye~~~~~~~~~~~i~~~nc~hcktc~ik~p~~~i~w~~p~  544 (554)
T Consensus       128 ~p~C~~~CP~~Ai~~--~~~~G~v~~d~~~CigC~~C~~aCP~~~~~~~~~~  177 (208)
T PRK09898        128 EPQCMNVCPIGAITW--QQKEGCITVDHKRCIGCSACTTACPWMMATVNTES  177 (208)
T ss_pred             CCHHHHHCCCCCEEE--ECCCCEEEEEHHHCCCCCHHHHHCCCCCCEECCCC
T ss_conf             926888578576387--07997599877768041189973999985767888