HHsearch alignment for GI: 254781024 and conserved domain: PRK12416
>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=98.10 E-value=5.5e-06 Score=60.49 Aligned_cols=42 Identities=31% Similarity=0.584 Sum_probs=37.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCC----CCEEEEEECCCCCCCCCCC
Q ss_conf 77999897689999999998089----9739999786778986402
Q gi|254781024|r 16 DVVIIGAGPAGLAAAIRCKQINP----HLSVVILEKSAEVGAHILS 57 (554)
Q Consensus 16 DVvIVGaGPAG~saA~~La~~g~----~l~VlvlEK~~~pG~~i~s 57 (554)
T Consensus 3 ~vaVIGgGISGLsaA~~L~~~~~~~~~~~~vtl~Eas~r~GG~I~T 48 (466)
T PRK12416 3 TVVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHS 48 (466)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEE
T ss_conf 5999899789999999998725555899867999779988677989