HHsearch alignment for GI: 254781024 and conserved domain: PRK12779
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=98.24 E-value=1.9e-06 Score=63.75 Aligned_cols=75 Identities=23% Similarity=0.151 Sum_probs=49.0
Q ss_pred EECCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 63035134005421248742308879961232331366435226899999999999999874588653036789986420
Q gi|254781024|r 300 RLEYGARVISEGGWQSVPKLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKHDDPIEIEDSWRQT 379 (554)
Q Consensus 300 ~~~yga~~ip~gg~~s~pk~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~~~l~~Ye~~~~~s 379 (554)
T Consensus 575 ~~k~G~I~vd~~t~----~Ts~~gVfAGGD~vr-----G~aTVIlAmgdG~~AAkei~~~~---~~--~~~e~~~~v~~a 640 (944)
T PRK12779 575 TNKWGTIEVEAGSQ----RTSIKDVYSGGDAAR-----GGSTAIRAAGDGQAAAKEIVGEI---PF--TPAEIKTRVERA 640 (944)
T ss_pred CCCCCEEEECCCCC----CCCCCCEEECCCCCC-----CHHHHHHHHHHHHHHHHHHHCCC---CC--CHHHHHHHHHHH
T ss_conf 16785199885557----667777763355024-----56789887554599999985469---99--989999999999
Q ss_pred HHHHHHHHH
Q ss_conf 466788874
Q gi|254781024|r 380 QIGKDLWII 388 (554)
Q Consensus 380 ~~~~el~~~ 388 (554)
T Consensus 641 ~~yt~~~~~ 649 (944)
T PRK12779 641 ARYTELGQI 649 (944)
T ss_pred HHHHHHCCC
T ss_conf 876663026