HHsearch alignment for GI: 254781024 and conserved domain: PRK12843

Probab=99.50  E-value=6.7e-13  Score=108.57  Aligned_cols=91  Identities=14%  Similarity=0.137  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE-EEEEEECCCCCHHHHHH
Q ss_conf             98999999998749533068224347762776201454124324434665787563026774-25786066443255421
Q gi|254781024|r  122 QVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLS-KYMLVGEGACGSLTRQL  200 (554)
Q Consensus       122 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~A-k~vI~AdG~~s~lak~l  200 (554)
T Consensus       220 ~l~~~l~~~~~~~gv~i~~~t~~~~L~~-d~g~V~Gv~~~~~g~------------~~~i~A~k~VVLATGGf~~N~em~  286 (576)
T PRK12843        220 ALVARLLYSLRKRGVRILTQTDVESLET-DHGRVIGATVVVGGV------------PRRIRARKGVVLATGGFNRHPELR  286 (576)
T ss_pred             HHHHHHHHHHHHCCCEEEECCEEEEEEE-ECCEEEEEEEEECCE------------EEEEEECCCEEEECCCCCCCHHHH
T ss_conf             9999999999974987993785158884-199799999998996------------799993470899169977699999


Q ss_pred             HHHCCC-----CCCCCHHHHHHHHHHHHHHC
Q ss_conf             122489-----98888989988988887516
Q gi|254781024|r  201 IERYSL-----MDGRQPQKFGLGIKELWKIK  226 (554)
Q Consensus       201 ~~~~~l-----~~~~~p~~~~~gvke~~ei~  226 (554)
T Consensus       287 -~~y~p~~~~~~~~~~~~~tGdGi~ma~~~G  316 (576)
T PRK12843        287 -RELLPATVARYSPCAPGHTGAAIDLALDLG  316 (576)
T ss_pred             -HHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf             -973866434656688897858999999818