HHsearch alignment for GI: 254781024 and conserved domain: PRK13339
>PRK13339 malate:quinone oxidoreductase; Reviewed.
Probab=98.19 E-value=1.9e-05 Score=56.76 Aligned_cols=174 Identities=18% Similarity=0.260 Sum_probs=96.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC-----C-----CCC------------EEC-HHH--HHH
Q ss_conf 647799989768999999999808997399997867789864-----0-----274------------033-367--888
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHI-----L-----SGA------------IID-PIG--IDS 68 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i-----~-----sG~------------vl~-p~a--L~e 68 (554)
T Consensus 6 ~~DVvLIGaGIMsaTL~~lL~el~P~~~I~l~Erl~~~A~ESS~~wNNAGTGHaa~CElNYTp~~~dg~i~i~KA~~Ine 85 (497)
T PRK13339 6 SKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNERNNAGTGHAALCELNYTVQQADGSIDIKKAKEINE 85 (497)
T ss_pred CCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHHH
T ss_conf 77889989528899999999976998748999814754544078866552210010220488765698241799999999
Q ss_pred H----------------CCCHHHHC-CCCCCCEEEE-EEEEEEC-------CC-----CCEE-----CCCCCCCCCCC--
Q ss_conf 6----------------78726414-8854322436-6999977-------99-----7677-----36543565446--
Q gi|254781024|r 69 L----------------LPRWREDK-GHPFHTVVKR-DLYWFLN-------AQ-----RSIQ-----IPHFCLPDFMD-- 111 (554)
Q Consensus 69 L----------------~Pd~~e~~-g~pl~~~v~~-d~~~~l~-------~~-----~~~~-----~p~~~~p~~~~-- 111 (554)
T Consensus 86 qFe~S~QfWs~lv~~g~l~~p~~FI~~~PHmSfV~Ge~nv~fLrkRyeal~~~~lF~~MefseD~~~i~~-w~PLvm~gR 164 (497)
T PRK13339 86 QFEISKQFWGHLVKKGTIGNPREFINPLPHISFVRGKNNVKFLKKRFEALKQHPMFDNIEYTEDIEVMAK-WMPLMMPGR 164 (497)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHH-HCCEEECCC
T ss_conf 9999999999998657879857873779824675675888999999998734878777686059899975-377522698
Q ss_pred ----------CCCCEEEEHHHHHHHHHHHHHHC-CCEECCCCEEEEEEECCCC-CEEEEEECCCCCCCCCCCCCCCCCEE
Q ss_conf ----------78826888889899999999874-9533068224347762776-20145412432443466578756302
Q gi|254781024|r 112 ----------NKEHYIVSLGQVCRWLKNKAEAL-GVEIYCGFTATEIYYGKKG-EALGILTGEKGKNYDGTQGKHYIAPM 179 (554)
Q Consensus 112 ----------~~g~yiv~r~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~e~g-~vvgv~t~~~G~~k~~~~~~~~~~g~ 179 (554)
T Consensus 165 ~~~e~vAAtr~~~GTDVdFGaLTr~l~~~l~~~~~~~v~~~~eV~~i~r~~dg~w~v~v~~~~~~~------------~~ 232 (497)
T PRK13339 165 EADEIMAASKIDEGTDVNFGALTRKMAKSLEAHPNAQVQYNHEVVDLERLSDGGWEVTVKDRNTGG------------KR 232 (497)
T ss_pred CCCCCEEEEECCCCEEECHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCC------------EE
T ss_conf 978855588257853401899999999999748983999478863217789998899999657897------------59
Q ss_pred EEEEEEEEEECCCCC-HHHHHH
Q ss_conf 677425786066443-255421
Q gi|254781024|r 180 LLLSKYMLVGEGACG-SLTRQL 200 (554)
Q Consensus 180 ~i~Ak~vI~AdG~~s-~lak~l 200 (554)
T Consensus 233 ~~~A~fVFvGAGG~sL~LLQks 254 (497)
T PRK13339 233 EQVADYVFIGAGGGAIPLLQKS 254 (497)
T ss_pred EEEECEEEECCCHHHHHHHHHC
T ss_conf 9993679988873778999984