HHsearch alignment for GI: 254781024 and conserved domain: PTZ00139
>PTZ00139 succinate dehydrogenase (flavoprotein) subunit; Provisional.
Probab=99.71 E-value=1.7e-13 Score=112.75 Aligned_cols=167 Identities=19% Similarity=0.258 Sum_probs=102.8
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC--CCC---EEC-----------------------HHH
Q ss_conf 6477999897689999999998089973999978677898640--274---033-----------------------367
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHIL--SGA---IID-----------------------PIG 65 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~--sG~---vl~-----------------------p~a 65 (554)
T Consensus 34 ~yDVlVIGsG~AGL~AAi~a~~~G--~~V~lleK~~~~~snS~~AqGGInaa~~~~~eDs~e~h~~DTlkaG~~l~d~~l 111 (622)
T PTZ00139 34 TYDAVVVGAGGAGLRAALGLSESG--YKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDA 111 (622)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
T ss_conf 658799996699999999999769--908999788999974899987787406789999989999999986268779999
Q ss_pred HHHHC---C---CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCC-CCCEEE--EHHHHHHHHHHHHHHCCC
Q ss_conf 88867---8---72641488543224366999977997677365435654467-882688--888989999999987495
Q gi|254781024|r 66 IDSLL---P---RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDN-KEHYIV--SLGQVCRWLKNKAEALGV 136 (554)
Q Consensus 66 L~eL~---P---d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~-~g~yiv--~r~~fd~~L~~~Ae~~Gv 136 (554)
T Consensus 112 v~~l~~~a~~~V~~Le~~Gv~f~r~--~~G~~~~r~~Gg~s~~~~--~-g~~~~R~~~~~d~tG~~i~~~L~~~~~~~~i 186 (622)
T PTZ00139 112 IHYMCKEAPCAVSELESYGLPFSRT--KDGKIYQRAFGGQSLKFG--K-GGQAYRCCAAADRTGHAMLHTLYGQSLQYNC 186 (622)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEC--CCCCEEECCCCCEECCCC--C-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9999998999999999779972257--998781215677203466--7-8741578875786199999999999986599
Q ss_pred EECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHH
Q ss_conf 3306822434776277620145412432443466578756302677425786066443255
Q gi|254781024|r 137 EIYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLT 197 (554)
Q Consensus 137 ei~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~la 197 (554)
T Consensus 187 ~~~~~~~~~~ll~~~~g~v~Gv~~~~~~---~g-------~~~~i~AkaVVLATGG~g~~~ 237 (622)
T PTZ00139 187 NFFIEYFCLDLIMDEDGCCRGVVAMSIA---DG-------TIHRFRSKYTVIATGGYGRAY 237 (622)
T ss_pred EEEEEEEEEEEEECCCCEEEEEEEEECC---CC-------EEEEEEEEEEEECCCCCCCCE
T ss_conf 7999889999997589959999999778---99-------099997136998778754334