HHsearch alignment for GI: 254781024 and conserved domain: PTZ00306
>PTZ00306 NADH-dependent fumarate reductase; Provisional.
Probab=99.22 E-value=2.1e-09 Score=84.29 Aligned_cols=193 Identities=19% Similarity=0.237 Sum_probs=103.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC--CCCCEE--CHHHHHHH-CC----------------
Q ss_conf 3647799989768999999999808997399997867789864--027403--33678886-78----------------
Q gi|254781024|r 13 FEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHI--LSGAII--DPIGIDSL-LP---------------- 71 (554)
Q Consensus 13 meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i--~sG~vl--~p~aL~eL-~P---------------- 71 (554)
T Consensus 408 lP~rVIVVGsGlAGLSAAIeA~e~G--akVVLLEKmp~lGGNS~KASSGINgAgT~~Qk~~GI~DS~ElF~~DTlKSGkG 485 (1167)
T PTZ00306 408 LPARVIVVGGGLAGCSAAIEAASCG--AQVILLEKEAKLGGNSAKATSGINGWGTRAQAKQDVLDGGKFFERDTHLSGKG 485 (1167)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 9986899897579999999999779--95799957898887400331573668977789709988888999998873378
Q ss_pred -------------------CHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH
Q ss_conf -------------------7264148854322436699997799767736543565446788268888898999999998
Q gi|254781024|r 72 -------------------RWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAE 132 (554)
Q Consensus 72 -------------------d~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae 132 (554)
T Consensus 486 ~n~DPeLVr~La~~SadAIeWL~e~GVdLs~---------LsqLGGHSvkRTHR~~~-~~~G~pvPiG~~Iv~~Le~~ik 555 (1167)
T PTZ00306 486 GHCDPGLVKTLSVKSADAISWLSSLGVPLTV---------LSQLGGASRKRCHRAPD-KKDGTPVPIGFTIMRTLEDHIR 555 (1167)
T ss_pred CCCCHHHHHHHHHCCHHHHHHHHHCCCCHHH---------HCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999799999997348899999984998477---------02456878676467988-7788646765999999999998
Q ss_pred ---HCCCEECCCCEEEEEEECCCC--------CEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHH--HHH
Q ss_conf ---749533068224347762776--------2014541243244346657875630267742578606644325--542
Q gi|254781024|r 133 ---ALGVEIYCGFTATEIYYGKKG--------EALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSL--TRQ 199 (554)
Q Consensus 133 ---~~Gvei~~g~~v~~i~~~e~g--------~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~l--ak~ 199 (554)
T Consensus 556 ~kl~~~V~I~~~tkVt~LL~d~~g~~DG~~~~kVtGVey~~~-~d~e-------G~~~tI~AkaVVLATGGFgaDke~~s 627 (1167)
T PTZ00306 556 TKLSGRVTIMTETTVTSLLSESSARPDGVREIRVTGVRYKQA-SDAS-------GQVMDLLADAVILATGGFSNDHTPNS 627 (1167)
T ss_pred HHCCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEEEEEEEC-CCCC-------CCEEEEECCEEEEECCCCCCCHHHHH
T ss_conf 635567278855789998741576756765315888998423-5678-------85499834779996888776620667
Q ss_pred HHHHC-----CCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11224-----899888898998898888751
Q gi|254781024|r 200 LIERY-----SLMDGRQPQKFGLGIKELWKI 225 (554)
Q Consensus 200 l~~~~-----~l~~~~~p~~~~~gvke~~ei 225 (554)
T Consensus 628 LLkkYrPdL~~fpTTNgpgATGDGIkMA~~I 658 (1167)
T PTZ00306 628 LLREYAPQLSGFPTTNGPWATGDGVKLARKL 658 (1167)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 8876396436888889999762689999985