HHsearch alignment for GI: 254781024 and conserved domain: PTZ00318
>PTZ00318 NADH dehydrogenase; Provisional.
Probab=94.50 E-value=0.045 Score=33.30 Aligned_cols=49 Identities=16% Similarity=0.095 Sum_probs=35.4
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCC----CCCCCCCCCEECHHH
Q ss_conf 477999897689999999998089973999978677----898640274033367
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAE----VGAHILSGAIIDPIG 65 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~----pG~~i~sG~vl~p~a 65 (554)
T Consensus 11 prVVIlGgGfaGl~~ak~L~~~~--~~VtLVdp~ny~lF~PLL~qvAtGtLe~r~ 63 (514)
T PTZ00318 11 PNVVVVGTGWAGCYFARHLNPKL--ANLHVLSTRNHMVFTPLLPQTTTGTLEFRS 63 (514)
T ss_pred CEEEEECCCHHHHHHHHHHCCCC--CCEEEECCCCCCCCCHHHHHHHHCCCCHHH
T ss_conf 85899997699999999738689--828999999985010216766205777577