HHsearch alignment for GI: 254781024 and conserved domain: TIGR00551

>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=98.71  E-value=1.8e-07  Score=70.73  Aligned_cols=314  Identities=22%  Similarity=0.254  Sum_probs=167.2

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC--C-CCCCCC---------C-EECHHHHHHH----------
Q ss_conf             364779998976899999999980899739999786778--9-864027---------4-0333678886----------
Q gi|254781024|r   13 FEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEV--G-AHILSG---------A-IIDPIGIDSL----------   69 (554)
Q Consensus        13 meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~p--G-~~i~sG---------~-vl~p~aL~eL----------   69 (554)
T Consensus         1 ~~~dV~viGsGaAGL~aAlal~~~~--~~V~v~~K~a~~~~~~s~yAQGGIAa~~~~~DdSi~~Hv~DTL~AGaG~cD~~   78 (546)
T TIGR00551         1 SEADVVVIGSGAAGLSAALALAEKY--RDVVVISKAAEVKESASYYAQGGIAAALAETDDSIDAHVEDTLAAGAGLCDEE   78 (546)
T ss_pred             CCCEEEEECCHHHHHHHHHHCCCCC--CEEEEECCCCCCCCCCCCEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHH
T ss_conf             9635999752089999998533268--63789758755556752000112663038755856877899998446788688


Q ss_pred             -----CC------CHHHHCCCCCCCEEEE--EEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH-HCC
Q ss_conf             -----78------7264148854322436--699997799767736543565446788268888898999999998-749
Q gi|254781024|r   70 -----LP------RWREDKGHPFHTVVKR--DLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAE-ALG  135 (554)
Q Consensus        70 -----~P------d~~e~~g~pl~~~v~~--d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae-~~G  135 (554)
T Consensus        79 aV~~v~~~~~~av~~L~~~Gv~FD~~~~gnGee~~~LtrEGgHS~~R-----I~HA~GD--aTGr~~~~~L~~~a~~~p~  151 (546)
T TIGR00551        79 AVEFVVSDAKEAVQELVEAGVSFDRNEQGNGEERLALTREGGHSYRR-----ILHAAGD--ATGREVISTLLKKARSEPN  151 (546)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC-----EEEECCC--CCHHHHHHHHHHHHHCCCC
T ss_conf             99999853689999998669220267798874431001335667774-----2773576--3248999999999743776


Q ss_pred             CEECCCCEEEEEEEC------CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf             533068224347762------77620145412432443466578756302677425786066443255421122489988
Q gi|254781024|r  136 VEIYCGFTATEIYYG------KKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDG  209 (554)
Q Consensus       136 vei~~g~~v~~i~~~------e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~  209 (554)
T Consensus       152 ~~~~~~~~A~~l~i~dkiGlP~~g~~~G~~v~~~n--K--------~~~e~~~a~aVvLAtGG~g~ly~~TT-------N  214 (546)
T TIGR00551       152 VEIIEGEVALDLLIEDKIGLPTTGRVVGVLVVDSN--K--------ETVETLHADAVVLATGGLGKLYSFTT-------N  214 (546)
T ss_pred             EEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCC--C--------CEEEEEECCEEEEECCCCCHHHHHHC-------C
T ss_conf             24101214444442250247988879999997167--8--------72377630100032077321003123-------8


Q ss_pred             CCHHHHHHHHHHHHH-------HCCCCCCCCEEEE-EE--CCCCCCC-C-CCCEEEEECCCCEEE--------------E
Q ss_conf             889899889888875-------1656678880899-50--4347687-6-641257664798059--------------9
Q gi|254781024|r  210 RQPQKFGLGIKELWK-------IKPQYHRRGLALH-SI--GWPLDMN-T-SGGGFVYHFDDNLVS--------------I  263 (554)
Q Consensus       210 ~~p~~~~~gvke~~e-------i~~~~~~~G~~~h-~~--g~~~~~~-~-~gggwiy~~~d~~~~--------------i  263 (554)
T Consensus       215 p~-~stGDGIala~raG~~v~DLEF~QFHPT~L~~~~~GG~~~LitEAvRGEGA~Lvd~~G~Rf~~~~hp~GeLAPRDiV  293 (546)
T TIGR00551       215 PK-VSTGDGIALAWRAGVEVRDLEFVQFHPTALVKPRVGGRYFLITEAVRGEGAILVDRDGKRFMADVHPRGELAPRDIV  293 (546)
T ss_pred             CC-CCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEECCCCCCCCCCCCHHHH
T ss_conf             87-42314689998728722046342567211137887898764001100387423558886702677888876740488


Q ss_pred             EE----------------EECCCCCCCCCCHHHHHHHHH-HCCCHHHHHCCC--------CEECCCCEECCCCCCCCC--
Q ss_conf             99----------------832666566889889999986-080045650388--------263035134005421248--
Q gi|254781024|r  264 GF----------------VLHLDYRNPWISAYEELQRFK-THPDIRIIFTEG--------ERLEYGARVISEGGWQSV--  316 (554)
Q Consensus       264 G~----------------v~~ld~~~~~~~~~~~lq~fk-~hp~i~~~l~gg--------~~~~yga~~ip~gg~~s~--  316 (554)
T Consensus       294 aRAI~~~m~~~~~dPtqacVfLD~s~--Ie~----~~f~~RFP~I~~~c~~~GID~~~~~IPv~P~AHY-~~GGi~vD~~  366 (546)
T TIGR00551       294 ARAIDEEMKKGGKDPTQACVFLDASG--IED----DFFKSRFPTITAKCRGAGIDIVREPIPVVPAAHY-TMGGISVDAY  366 (546)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCC--CCH----HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE-EECCEEECCC
T ss_conf             99999999722879340688874358--883----4652127278999985788755587154466715-7367887576


Q ss_pred             CCCCCCCEEEECCCCCC-C---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             74230887996123233-1---36643522689999999999999987
Q gi|254781024|r  317 PKLSFPGGSLIGCAAGF-V---NLLRIKGSHNAIISGMLAAEKIVERL  360 (554)
Q Consensus       317 pk~~~~g~lLvGDAAG~-v---nP~~g~GI~~Am~SG~lAAEai~eal  360 (554)
T Consensus       367 g~T~~~GLYAiGE~A~tGlHGANRLASNSLLEclV~G~~aa~~i~~~~  414 (546)
T TIGR00551       367 GRTTVPGLYAIGEVACTGLHGANRLASNSLLECLVFGLRAARAISRKP  414 (546)
T ss_pred             CEECCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             332134301200243066511467777878899873289999986535