HHsearch alignment for GI: 254781024 and conserved domain: TIGR00551
>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=98.71 E-value=1.8e-07 Score=70.73 Aligned_cols=314 Identities=22% Similarity=0.254 Sum_probs=167.2
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC--C-CCCCCC---------C-EECHHHHHHH----------
Q ss_conf 364779998976899999999980899739999786778--9-864027---------4-0333678886----------
Q gi|254781024|r 13 FEYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEV--G-AHILSG---------A-IIDPIGIDSL---------- 69 (554)
Q Consensus 13 meyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~p--G-~~i~sG---------~-vl~p~aL~eL---------- 69 (554)
T Consensus 1 ~~~dV~viGsGaAGL~aAlal~~~~--~~V~v~~K~a~~~~~~s~yAQGGIAa~~~~~DdSi~~Hv~DTL~AGaG~cD~~ 78 (546)
T TIGR00551 1 SEADVVVIGSGAAGLSAALALAEKY--RDVVVISKAAEVKESASYYAQGGIAAALAETDDSIDAHVEDTLAAGAGLCDEE 78 (546)
T ss_pred CCCEEEEECCHHHHHHHHHHCCCCC--CEEEEECCCCCCCCCCCCEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 9635999752089999998533268--63789758755556752000112663038755856877899998446788688
Q ss_pred -----CC------CHHHHCCCCCCCEEEE--EEEEEECCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH-HCC
Q ss_conf -----78------7264148854322436--699997799767736543565446788268888898999999998-749
Q gi|254781024|r 70 -----LP------RWREDKGHPFHTVVKR--DLYWFLNAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAE-ALG 135 (554)
Q Consensus 70 -----~P------d~~e~~g~pl~~~v~~--d~~~~l~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae-~~G 135 (554)
T Consensus 79 aV~~v~~~~~~av~~L~~~Gv~FD~~~~gnGee~~~LtrEGgHS~~R-----I~HA~GD--aTGr~~~~~L~~~a~~~p~ 151 (546)
T TIGR00551 79 AVEFVVSDAKEAVQELVEAGVSFDRNEQGNGEERLALTREGGHSYRR-----ILHAAGD--ATGREVISTLLKKARSEPN 151 (546)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC-----EEEECCC--CCHHHHHHHHHHHHHCCCC
T ss_conf 99999853689999998669220267798874431001335667774-----2773576--3248999999999743776
Q ss_pred CEECCCCEEEEEEEC------CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 533068224347762------77620145412432443466578756302677425786066443255421122489988
Q gi|254781024|r 136 VEIYCGFTATEIYYG------KKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDG 209 (554)
Q Consensus 136 vei~~g~~v~~i~~~------e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~ 209 (554)
T Consensus 152 ~~~~~~~~A~~l~i~dkiGlP~~g~~~G~~v~~~n--K--------~~~e~~~a~aVvLAtGG~g~ly~~TT-------N 214 (546)
T TIGR00551 152 VEIIEGEVALDLLIEDKIGLPTTGRVVGVLVVDSN--K--------ETVETLHADAVVLATGGLGKLYSFTT-------N 214 (546)
T ss_pred EEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCC--C--------CEEEEEECCEEEEECCCCCHHHHHHC-------C
T ss_conf 24101214444442250247988879999997167--8--------72377630100032077321003123-------8
Q ss_pred CCHHHHHHHHHHHHH-------HCCCCCCCCEEEE-EE--CCCCCCC-C-CCCEEEEECCCCEEE--------------E
Q ss_conf 889899889888875-------1656678880899-50--4347687-6-641257664798059--------------9
Q gi|254781024|r 210 RQPQKFGLGIKELWK-------IKPQYHRRGLALH-SI--GWPLDMN-T-SGGGFVYHFDDNLVS--------------I 263 (554)
Q Consensus 210 ~~p~~~~~gvke~~e-------i~~~~~~~G~~~h-~~--g~~~~~~-~-~gggwiy~~~d~~~~--------------i 263 (554)
T Consensus 215 p~-~stGDGIala~raG~~v~DLEF~QFHPT~L~~~~~GG~~~LitEAvRGEGA~Lvd~~G~Rf~~~~hp~GeLAPRDiV 293 (546)
T TIGR00551 215 PK-VSTGDGIALAWRAGVEVRDLEFVQFHPTALVKPRVGGRYFLITEAVRGEGAILVDRDGKRFMADVHPRGELAPRDIV 293 (546)
T ss_pred CC-CCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCEECCCCCCCCCCCCHHHH
T ss_conf 87-42314689998728722046342567211137887898764001100387423558886702677888876740488
Q ss_pred EE----------------EECCCCCCCCCCHHHHHHHHH-HCCCHHHHHCCC--------CEECCCCEECCCCCCCCC--
Q ss_conf 99----------------832666566889889999986-080045650388--------263035134005421248--
Q gi|254781024|r 264 GF----------------VLHLDYRNPWISAYEELQRFK-THPDIRIIFTEG--------ERLEYGARVISEGGWQSV-- 316 (554)
Q Consensus 264 G~----------------v~~ld~~~~~~~~~~~lq~fk-~hp~i~~~l~gg--------~~~~yga~~ip~gg~~s~-- 316 (554)
T Consensus 294 aRAI~~~m~~~~~dPtqacVfLD~s~--Ie~----~~f~~RFP~I~~~c~~~GID~~~~~IPv~P~AHY-~~GGi~vD~~ 366 (546)
T TIGR00551 294 ARAIDEEMKKGGKDPTQACVFLDASG--IED----DFFKSRFPTITAKCRGAGIDIVREPIPVVPAAHY-TMGGISVDAY 366 (546)
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCC--CCH----HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE-EECCEEECCC
T ss_conf 99999999722879340688874358--883----4652127278999985788755587154466715-7367887576
Q ss_pred CCCCCCCEEEECCCCCC-C---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 74230887996123233-1---36643522689999999999999987
Q gi|254781024|r 317 PKLSFPGGSLIGCAAGF-V---NLLRIKGSHNAIISGMLAAEKIVERL 360 (554)
Q Consensus 317 pk~~~~g~lLvGDAAG~-v---nP~~g~GI~~Am~SG~lAAEai~eal 360 (554)
T Consensus 367 g~T~~~GLYAiGE~A~tGlHGANRLASNSLLEclV~G~~aa~~i~~~~ 414 (546)
T TIGR00551 367 GRTTVPGLYAIGEVACTGLHGANRLASNSLLECLVFGLRAARAISRKP 414 (546)
T ss_pred CEECCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 332134301200243066511467777878899873289999986535