HHsearch alignment for GI: 254781024 and conserved domain: TIGR01318
>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=98.93 E-value=8.5e-09 Score=80.02 Aligned_cols=35 Identities=43% Similarity=0.746 Sum_probs=33.1
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 7999897689999999998089973999978677898
Q gi|254781024|r 17 VVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGA 53 (554)
Q Consensus 17 VvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~ 53 (554)
T Consensus 146 VAviGAGPAGLaCAD~L~RaG--V~v~VfDRhP~iGG 180 (480)
T TIGR01318 146 VAVIGAGPAGLACADILARAG--VQVVVFDRHPEIGG 180 (480)
T ss_pred EEEECCCCCHHHHHHHHHHCC--CEEEEEECCCCCCC
T ss_conf 899778860257999875178--55999747703076