HHsearch alignment for GI: 254781024 and conserved domain: TIGR01789
>TIGR01789 lycopene_cycl lycopene cyclase; InterPro: IPR008461 This family consists of several bacterial Lycopene cyclase (CrtY) proteins. Lycopene cyclase is a key enzyme which converts the acyclic carotenoid lycopene into the cyclic carotenoid beta-carotene .; GO: 0045436 lycopene beta cyclase activity, 0016117 carotenoid biosynthetic process.
Probab=99.11 E-value=6.8e-09 Score=80.72 Aligned_cols=302 Identities=18% Similarity=0.175 Sum_probs=156.0
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEC
Q ss_conf 7799989768999999999808997399997867789-864027403336788867872641488543224366999977
Q gi|254781024|r 16 DVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVG-AHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFLN 94 (554)
Q Consensus 16 DVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG-~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l~ 94 (554)
T Consensus 1 D~i~vGgGLAggLIALrL~~arPd~Ri~~IEa~~~igGNHtWS--ffd~--------------------Dls~~qhawla 58 (392)
T TIGR01789 1 DVIVVGGGLAGGLIALRLQDARPDLRILVIEAAASIGGNHTWS--FFDA--------------------DLSDAQHAWLA 58 (392)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEE--EECC--------------------CCCHHHHHHHH
T ss_conf 9788727335789999875259872899984377668875301--0036--------------------66743577765
Q ss_pred CCC--------CEECCCCCCCCCCCCCCCE-EEEHHHHHHHHHHHHHHCCCE-ECCCCEEEEEEECCCCCEEEEEECCCC
Q ss_conf 997--------6773654356544678826-888889899999999874953-306822434776277620145412432
Q gi|254781024|r 95 AQR--------SIQIPHFCLPDFMDNKEHY-IVSLGQVCRWLKNKAEALGVE-IYCGFTATEIYYGKKGEALGILTGEKG 164 (554)
Q Consensus 95 ~~~--------~~~~p~~~~p~~~~~~g~y-iv~r~~fd~~L~~~Ae~~Gve-i~~g~~v~~i~~~e~g~vvgv~t~~~G 164 (554)
T Consensus 59 ~lv~~~WpgGYeVRFp~~r--rkL--~taY~S~tStrf~e~l~---q~fpe~s~~~~r~a~~~~--Ad~----V~L~--- 122 (392)
T TIGR01789 59 DLVVYDWPGGYEVRFPKRR--RKL--KTAYLSMTSTRFREELE---QKFPERSVLLDRKAVEVD--ADA----VDLE--- 122 (392)
T ss_pred HHCCCCCCCCCEECCHHHH--HHH--HCCCCCCHHHHHHHHHH---HHCCCCEEEECCEEEEEE--ECE----EEEC---
T ss_conf 3401328897133355554--332--10221100177899999---876872056401567766--075----6626---
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
Q ss_conf 44346657875630267742578606644325542112248998888989988988887516566788808995043476
Q gi|254781024|r 165 KNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTRQLIERYSLMDGRQPQKFGLGIKELWKIKPQYHRRGLALHSIGWPLD 244 (554)
Q Consensus 165 ~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak~l~~~~~l~~~~~p~~~~~gvke~~ei~~~~~~~G~~~h~~g~~~~ 244 (554)
T Consensus 123 -------PsqyG~g~~i~A~~VID~Rg~~P~~~L~~G--------f--Q~F-lG~e~RL~~PHGl~~PiiMDATVdQ~~P 184 (392)
T TIGR01789 123 -------PSQYGNGRVIRARAVIDARGFKPSAALKVG--------F--QVF-LGREVRLAEPHGLESPIIMDATVDQSDP 184 (392)
T ss_pred -------CCCCCCCCEEEEEEEEECCCCCCCCCCCCC--------H--HHH-HCCCHHCCCCCCCCCCEEECCCHHHCCC
T ss_conf -------544689626764027725888777210253--------2--344-2320001578888887042562421177
Q ss_pred CC-CCCCEEEEECC--CCEEEEEEEECCCCC-CCCCCHHHHHHHHHHCCCHHHHHCCCCEECCCCEECCC---CCCCCC-
Q ss_conf 87-66412576647--980599998326665-66889889999986080045650388263035134005---421248-
Q gi|254781024|r 245 MN-TSGGGFVYHFD--DNLVSIGFVLHLDYR-NPWISAYEELQRFKTHPDIRIIFTEGERLEYGARVISE---GGWQSV- 316 (554)
Q Consensus 245 ~~-~~gggwiy~~~--d~~~~iG~v~~ld~~-~~~~~~~~~lq~fk~hp~i~~~l~gg~~~~yga~~ip~---gg~~s~- 316 (554)
T Consensus 185 hGnGGgYRFVY~LPL~~~~llI---EDTyY~D~~~L~~~~l~qrI~~YA~-a~gW~~~t~~r~EqGvLPv~l~GD~sa~~ 260 (392)
T TIGR01789 185 HGNGGGYRFVYVLPLDAQELLI---EDTYYADDAELDEEALRQRIDDYAL-AKGWQLATLVREEQGVLPVLLAGDSSAYV 260 (392)
T ss_pred CCCCCCEEEEEECCCCCCEEEE---EEEEECCCCCCCHHHHHHHHHHHHH-HCCCCHHHHHHHHCCCCCEEECCCCHHCC
T ss_conf 8798740278864798750136---6300058883878988547899986-42861012676535866230158730112
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCHHH-HHHHHHHHH
Q ss_conf 74230887996123233136643522689999999999999987458865-30367-899864204
Q gi|254781024|r 317 PKLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLSNGKKH-DDPIE-IEDSWRQTQ 380 (554)
Q Consensus 317 pk~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~~g~~~-~~l~~-Ye~~~~~s~ 380 (554)
T Consensus 261 ~~~~~PG~a~~Glragl~HP~TgYslp~AV~~Ad~l~a~~a---qrG~lss~~~~~~id~~ar~~W 323 (392)
T TIGR01789 261 DKVDIPGLAIAGLRAGLVHPTTGYSLPVAVEVADALAARDA---QRGALSSEDLREAIDSYARERW 323 (392)
T ss_pred CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 47788974013553024477413557899999999852010---0455677899999876555411