HHsearch alignment for GI: 254781024 and conserved domain: TIGR02032
>TIGR02032 GG-red-SF geranylgeranyl reductase family; InterPro: IPR011777 This entry includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates..
Probab=100.00 E-value=0 Score=375.47 Aligned_cols=322 Identities=22% Similarity=0.263 Sum_probs=242.2
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-CCCCCEECHHHHHHHCCCHH---HHCCCCCCCEEEEE--
Q ss_conf 4779998976899999999980899739999786778986-40274033367888678726---41488543224366--
Q gi|254781024|r 15 YDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAH-ILSGAIIDPIGIDSLLPRWR---EDKGHPFHTVVKRD-- 88 (554)
Q Consensus 15 yDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~-i~sG~vl~p~aL~eL~Pd~~---e~~g~pl~~~v~~d-- 88 (554)
T Consensus 1 yDVvvvGaGPaG~~aA~~~A~~G--~~Vllle~~~~~r~P~k~CGg~~~~~~~~~~~~~~~d~~~L~~~P~~~~~~~~~~ 78 (343)
T TIGR02032 1 YDVVVVGAGPAGSSAAYRLAKKG--LRVLLLEKKSFPRYPGKPCGGALSPRVLEELVLPGPDEYALKDIPKELIVNEVRT 78 (343)
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CEEEEEEEHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 93899827746899999999569--7388985045079886005776670013113678888613014774345420011
Q ss_pred ---EEEEECCCC-CEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCC
Q ss_conf ---999977997-6773654356544678826888889899999999874953306822434776277620145412432
Q gi|254781024|r 89 ---LYWFLNAQR-SIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATEIYYGKKGEALGILTGEKG 164 (554)
Q Consensus 89 ---~~~~l~~~~-~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~e~g~vvgv~t~~~G 164 (554)
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~R~~fD~~L~~~A~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~dd~ 154 (343)
T TIGR02032 79 LFNGARIISPNGDKVEIPIE---ELAFTEEAYVIDRDAFDEFLAERAQEAGAELRLGTTVLDVEIED-KVVVEVRGGDDE 154 (343)
T ss_pred EECCCEEEECCCCEEEECCH---HHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEECCEEEEEEECC-CEEEEEECCCCC
T ss_conf 00143388078632210222---11247437898526741899999975780675263761127618-368997268675
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHH-HHHHHCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCEEEEEECCC
Q ss_conf 4434665787563026774257860664432554-2112248998888989988988887516-5667888089950434
Q gi|254781024|r 165 KNYDGTQGKHYIAPMLLLSKYMLVGEGACGSLTR-QLIERYSLMDGRQPQKFGLGIKELWKIK-PQYHRRGLALHSIGWP 242 (554)
Q Consensus 165 ~~k~~~~~~~~~~g~~i~Ak~vI~AdG~~s~lak-~l~~~~~l~~~~~p~~~~~gvke~~ei~-~~~~~~G~~~h~~g~~ 242 (554)
T Consensus 155 ------------~~~~~~a~~vigADG~~S~~~~~~lg~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~D~v~v~~~~~ 222 (343)
T TIGR02032 155 ------------SKGEVTAKIVIGADGARSIVAKKKLGSSATLRENKEKRELGVALRAEVEMPVEEEVDEDFVEVYIDRG 222 (343)
T ss_pred ------------CCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCEEEEEECCC
T ss_conf ------------66046255899716887843212478778777775412024554677306767623574589997880
Q ss_pred CC-CCCCCCEEEEECCCCEEEEEEEEC--CCCCCCCCCHHHHHHHHH-HCCCHHHHHCC--CCEECCCCEE---CCCCCC
Q ss_conf 76-876641257664798059999832--666566889889999986-08004565038--8263035134---005421
Q gi|254781024|r 243 LD-MNTSGGGFVYHFDDNLVSIGFVLH--LDYRNPWISAYEELQRFK-THPDIRIIFTE--GERLEYGARV---ISEGGW 313 (554)
Q Consensus 243 ~~-~~~~gggwiy~~~d~~~~iG~v~~--ld~~~~~~~~~~~lq~fk-~hp~i~~~l~g--g~~~~yga~~---ip~gg~ 313 (554)
T Consensus 223 ~~qrv~ggY~W~FP~G~~~~nvG~g~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~~l~~~D~~~~~~~~~~~WliP~~~~ 302 (343)
T TIGR02032 223 LSQRVPGGYGWVFPKGDGTANVGVGSLPETDAAEEGEDLKKYLKDFLAARPVAKEDLKNEDAVEVEVIGAPKWLIPIRRP 302 (343)
T ss_pred EEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 13323787068854888689999875365112335566789999999964886136530477000001331345414863
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 2487423088799612323313664352268999999999999
Q gi|254781024|r 314 QSVPKLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKI 356 (554)
Q Consensus 314 ~s~pk~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai 356 (554)
T Consensus 303 ~--~~~~~~~~ll~GDAAg~V~P~~GgGI~yA~~~G~~Aa~~~ 343 (343)
T TIGR02032 303 D--EKLVRGNVLLVGDAAGFVKPLTGGGIYYAMRAGRVAAEVV 343 (343)
T ss_pred C--CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 2--2113488899933767226755671789999999862159