HHsearch alignment for GI: 254781024 and conserved domain: TIGR03143
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=93.53 E-value=0.15 Score=29.58 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=29.3
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42308879961232331366435226899999999999999874
Q gi|254781024|r 318 KLSFPGGSLIGCAAGFVNLLRIKGSHNAIISGMLAAEKIVERLS 361 (554)
Q Consensus 318 k~~~~g~lLvGDAAG~vnP~~g~GI~~Am~SG~lAAEai~eal~ 361 (554)
T Consensus 270 ~TnVpGVyAAGDV----~~k~lrQvvTA~~dGaiAA~~aerYi~ 309 (555)
T TIGR03143 270 ETNVPGVYAAGDL----RPKELRQVVTAVADGAIAATSAERYVK 309 (555)
T ss_pred CCCCCCEEECCCC----CCCCCCEEEEEHHHHHHHHHHHHHHHH
T ss_conf 0599988988345----289877354708757999999999999