HHsearch alignment for GI: 254781024 and conserved domain: pfam00890

>pfam00890 FAD_binding_2 FAD binding domain. This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Probab=99.49  E-value=1.1e-12  Score=106.96  Aligned_cols=170  Identities=22%  Similarity=0.304  Sum_probs=98.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC-CCCCEEC-------------HHH-HHHH-----------
Q ss_conf             7799989768999999999808997399997867789864-0274033-------------367-8886-----------
Q gi|254781024|r   16 DVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHI-LSGAIID-------------PIG-IDSL-----------   69 (554)
Q Consensus        16 DVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i-~sG~vl~-------------p~a-L~eL-----------   69 (554)
T Consensus         1 DVvVIG~G~AGl~AAi~Aae~G--a~VillEk~~~~gG~s~~s~G~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   78 (401)
T pfam00890         1 DVVVIGSGLAGLAAALEAAEAG--LKVAVVEKGQPFGGATAWSSGGIDALGTPPQGAGIDSPDLHPTDTLKGLDELADHP   78 (401)
T ss_pred             CEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCHHHHHCCCHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCCHH
T ss_conf             9899988699999999999789--94899978999997688845231004884351579999999999999658878899


Q ss_pred             ----C-------CCHHHHCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCC-CCEEEEHHHHHHHHHHHHHHCCCE
Q ss_conf             ----7-------8726414885432243669999779976773654356544678-826888889899999999874953
Q gi|254781024|r   70 ----L-------PRWREDKGHPFHTVVKRDLYWFLNAQRSIQIPHFCLPDFMDNK-EHYIVSLGQVCRWLKNKAEALGVE  137 (554)
Q Consensus        70 ----~-------Pd~~e~~g~pl~~~v~~d~~~~l~~~~~~~~p~~~~p~~~~~~-g~yiv~r~~fd~~L~~~Ae~~Gve  137 (554)
T Consensus        79 l~~~~~~~s~~~~dwl~~~G~~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~gv~  156 (401)
T pfam00890        79 YVEAFVEAAPEAVDWLEALGVPFSRSTEDGHID-LRPLGGLS-ATWRTPHDVADRRRGTLGTGHALLARLLEGALKRGID  156 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCC-CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf             999999867999999998399777567787111-33566666-6502103545445567888999999999999976998


Q ss_pred             ECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE-EEEEECCCCCHHHHHH
Q ss_conf             30682243477627762014541243244346657875630267742-5786066443255421
Q gi|254781024|r  138 IYCGFTATEIYYGKKGEALGILTGEKGKNYDGTQGKHYIAPMLLLSK-YMLVGEGACGSLTRQL  200 (554)
Q Consensus       138 i~~g~~v~~i~~~e~g~vvgv~t~~~G~~k~~~~~~~~~~g~~i~Ak-~vI~AdG~~s~lak~l  200 (554)
T Consensus       157 i~~~t~~~~Li~-d~g~V~Gv~~~~~~----------~g~~~~i~A~kaVIlAtGGf~~n~~~~  209 (401)
T pfam00890       157 FQPRHPADDLIV-EDGRVTGVVVENRR----------NGREVRIRAIAGVLLATGGFGRNAELL  209 (401)
T ss_pred             EEECCEEEEEEE-ECCEEEEEEEEECC----------CCEEEEEEEEEEEEECCCCHHHHHHHH
T ss_conf             993869615698-28858999999678----------980999995106799668813448876