HHsearch alignment for GI: 254781024 and conserved domain: pfam00996
>pfam00996 GDI GDP dissociation inhibitor.
Probab=97.01 E-value=0.0033 Score=41.21 Aligned_cols=103 Identities=22% Similarity=0.401 Sum_probs=65.7
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEE
Q ss_conf 64779998976899999999980899739999786778986402740333678886787264148854322436699997
Q gi|254781024|r 14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFL 93 (554)
Q Consensus 14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l 93 (554)
T Consensus 4 eyDVIIlGTGL~EsILaaaLS~~GK--kVLHiDrN~yYGg~---~ASl---~l~~l~~~~~~~~~~~~---------~~~ 66 (439)
T pfam00996 4 EYDVIVLGTGLKECILSGLLSVDGK--KVLHIDRNDYYGGE---SASL---SLEQLYARFRGGEEKPP---------SKL 66 (439)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCCCCCCC---CCCC---CHHHHHHHHCCCCCCCH---------HHH
T ss_conf 5029997998799999999973699--89997799877863---0152---89999998515667985---------560
Q ss_pred CCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEE
Q ss_conf 79976773654356544678826888889899999999874953306822434
Q gi|254781024|r 94 NAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATE 146 (554)
Q Consensus 94 ~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~ 146 (554)
T Consensus 67 g~sR~~niDL--~PK-------~l~a~g~LV~~Li~----S~V~rYLEFk~v~ 106 (439)
T pfam00996 67 GRSRDWNVDL--IPK-------FLMANGELVKLLIH----TDVTRYLEFKAVE 106 (439)
T ss_pred CCCCCCCCCC--CCH-------HEEECCHHHHHHHH----CCCHHEEEEEEEC
T ss_conf 5554661312--632-------03306579999986----6800146789825