HHsearch alignment for GI: 254781024 and conserved domain: pfam00996

>pfam00996 GDI GDP dissociation inhibitor.
Probab=97.01  E-value=0.0033  Score=41.21  Aligned_cols=103  Identities=22%  Similarity=0.401  Sum_probs=65.7

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEE
Q ss_conf             64779998976899999999980899739999786778986402740333678886787264148854322436699997
Q gi|254781024|r   14 EYDVVIIGAGPAGLAAAIRCKQINPHLSVVILEKSAEVGAHILSGAIIDPIGIDSLLPRWREDKGHPFHTVVKRDLYWFL   93 (554)
Q Consensus        14 eyDVvIVGaGPAG~saA~~La~~g~~l~VlvlEK~~~pG~~i~sG~vl~p~aL~eL~Pd~~e~~g~pl~~~v~~d~~~~l   93 (554)
T Consensus         4 eyDVIIlGTGL~EsILaaaLS~~GK--kVLHiDrN~yYGg~---~ASl---~l~~l~~~~~~~~~~~~---------~~~   66 (439)
T pfam00996         4 EYDVIVLGTGLKECILSGLLSVDGK--KVLHIDRNDYYGGE---SASL---SLEQLYARFRGGEEKPP---------SKL   66 (439)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCCCCCCC---CCCC---CHHHHHHHHCCCCCCCH---------HHH
T ss_conf             5029997998799999999973699--89997799877863---0152---89999998515667985---------560


Q ss_pred             CCCCCEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCEEEE
Q ss_conf             79976773654356544678826888889899999999874953306822434
Q gi|254781024|r   94 NAQRSIQIPHFCLPDFMDNKEHYIVSLGQVCRWLKNKAEALGVEIYCGFTATE  146 (554)
Q Consensus        94 ~~~~~~~~p~~~~p~~~~~~g~yiv~r~~fd~~L~~~Ae~~Gvei~~g~~v~~  146 (554)
T Consensus        67 g~sR~~niDL--~PK-------~l~a~g~LV~~Li~----S~V~rYLEFk~v~  106 (439)
T pfam00996        67 GRSRDWNVDL--IPK-------FLMANGELVKLLIH----TDVTRYLEFKAVE  106 (439)
T ss_pred             CCCCCCCCCC--CCH-------HEEECCHHHHHHHH----CCCHHEEEEEEEC
T ss_conf             5554661312--632-------03306579999986----6800146789825