Query gi|254781025|ref|YP_003065438.1| deoxyuridine 5 27-triphosphate nucleotidohydrolase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 154 No_of_seqs 108 out of 2328 Neff 6.1 Searched_HMMs 33803 Date Wed Jun 1 20:40:12 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254781025.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >1euw_A Dutpase, deoxyuridine 100.0 8.1E-42 0 257.6 10.6 149 1-153 2-151 (152) 2 >3c2t_A Deoxyuridine triphosph 100.0 8.2E-41 2.8E-45 251.9 10.5 141 1-153 1-141 (141) 3 >2baz_A YOSS, hypothetical pro 100.0 2.1E-39 6E-44 243.9 11.8 139 4-153 1-141 (142) 4 >3hza_A Deoxyuridine 5'-tripho 100.0 1E-39 2.9E-44 245.7 10.1 145 4-154 23-171 (174) 5 >2ol1_A Deoxyuridine 5'-tripho 100.0 3.8E-39 1.1E-43 242.4 10.6 140 4-154 8-147 (147) 6 >1dun_A Deoxyuridine 5'-tripho 100.0 5.7E-39 1.7E-43 241.4 9.0 132 14-154 3-134 (134) 7 >1f7d_A POL polyprotein; eight 100.0 1.5E-38 4.4E-43 239.0 9.8 131 13-154 3-133 (136) 8 >2p9o_A DUTP pyrophosphatase-l 100.0 3E-38 8.7E-43 237.3 11.0 139 5-153 31-169 (169) 9 >3ecy_A CG4584-PA, isoform A ( 100.0 3.3E-37 9.8E-42 231.3 12.8 133 13-153 27-159 (160) 10 >3f4f_A Deoxyuridine 5'-tripho 100.0 8.1E-37 2.4E-41 229.2 13.5 137 6-152 29-166 (167) 11 >3ca9_A Deoxyuridine triphosph 100.0 3.8E-37 1.1E-41 231.0 8.0 140 5-154 19-158 (165) 12 >3ehw_A DUTP pyrophosphatase; 100.0 7.5E-36 2.2E-40 223.6 13.0 134 13-154 31-164 (164) 13 >1vyq_A Deoxyuridine 5'-tripho 100.0 1.4E-36 4E-41 227.9 5.2 141 10-153 9-170 (173) 14 >2bsy_A Deoxyuridine 5'-tripho 100.0 2E-35 5.8E-40 221.3 10.6 123 14-153 2-124 (128) 15 >2qxx_A DCTP deaminase, deoxyc 100.0 1.1E-34 3.3E-39 217.0 10.7 133 12-154 46-178 (190) 16 >1xs1_A DCTP deaminase, deoxyc 100.0 8.2E-36 2.4E-40 223.4 4.5 136 8-154 51-186 (193) 17 >2d4n_A DU; jelly roll, hydrol 100.0 3.6E-34 1.1E-38 214.1 9.0 129 12-154 23-152 (152) 18 >1pkh_A Bifunctional deaminase 100.0 2.2E-35 6.6E-40 221.0 2.2 137 5-153 55-191 (204) 19 >3km3_A DCTP deaminase, deoxyc 100.0 4.2E-32 1.2E-36 202.3 9.3 127 13-153 74-200 (206) 20 >2r9q_A AGR_C_764P, 2'-deoxycy 100.0 8E-31 2.4E-35 195.0 9.2 125 15-153 56-187 (196) 21 >2yzj_A 167AA long hypothetica 100.0 3.5E-29 1E-33 185.7 10.5 130 4-149 39-168 (169) 22 >2r9q_A AGR_C_764P, 2'-deoxycy 99.9 2.6E-25 7.7E-30 163.7 6.5 108 14-127 60-173 (174) 23 >2bsy_A Deoxyuridine 5'-tripho 99.0 4.9E-09 1.5E-13 71.1 10.0 127 14-153 13-150 (150) 24 >3gzu_A Inner capsid protein V 42.7 8.9 0.00026 18.5 0.9 39 111-149 85-123 (224) 25 >1uwf_A FIMH protein, FIMH; ba 23.8 50 0.0015 14.2 5.0 95 29-127 17-136 (158) 26 >1klf_B FIMH protein, FIMH adh 23.0 52 0.0015 14.2 4.7 95 29-127 17-136 (159) No 1 >>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} (A:) Probab=100.00 E-value=8.1e-42 Score=257.57 Aligned_cols=149 Identities=40% Similarity=0.633 Sum_probs=134.2 Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCC-EEEEEEECCCCEEEEE Q ss_conf 963578999767547970374357886408789103778738937997399965860225876-1467875266313322 Q gi|254781025|r 1 MQSIDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPG-YEGQVRSRSGLALNYG 79 (154) Q Consensus 1 M~~~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g-~~~~i~~RSsl~~K~g 79 (154) |+.+.++++.-+.+..+.+|++.+++||||||+++ .++.++|+|+++++++|++++++|++ |.++|++|||++.|.. T Consensus 2 ~~~~~~~i~~~~~~~~~~~p~~~~~~~ag~Dl~~~--~~~~~~l~P~~~~lv~t~~~i~lP~~~~~~~i~~RSsl~~~g~ 79 (152) T 1euw_A 2 MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRAC--LNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHG 79 (152) T ss_dssp CCCCEEEECSTTBTTTBCCCCCSSTTCCCEEEECC--CSSCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHC T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCHHHEEECCC--CCCCEEECCCCEEEEECCEEEECCCCCEEEEEECCCCCHHHCC T ss_conf 85165899776656788877757998301617226--7886888999889987896998389876999952675313278 Q ss_pred EECCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 20235503665687887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 80 VACLNSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 80 l~~~n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) |.+.|++|+||+||||+|++.++|.++.++.|++|+||||++|.++..+.+++++ ++.+++||++||||||+ T Consensus 80 i~~~~~~g~iD~gy~G~i~i~l~N~~~~~~~I~~g~rIaQlv~~~~~~~~~~~~~--~~~~~~Rg~~gfGStG~ 151 (152) T 1euw_A 80 IVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVE--DFDATDRGEGGFGHSGR 151 (152) T ss_dssp EEETTSSEEECTTCCSEEEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCS--CC--------------- T ss_pred EEECCCCCEECCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEEECCCCEEEEC--CCCCCCCCCCCCCCCCC T ss_conf 5843656409899976179999957998989809998999998641446679934--16876334897676880 No 2 >>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* (A:) Probab=100.00 E-value=8.2e-41 Score=251.87 Aligned_cols=141 Identities=33% Similarity=0.516 Sum_probs=125.9 Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEE Q ss_conf 96357899976754797037435788640878910377873893799739996586022587614678752663133222 Q gi|254781025|r 1 MQSIDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGV 80 (154) Q Consensus 1 M~~~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl 80 (154) |.+ ++++++ ++++.+|+|++++||||||+++ ++++|+|++.++|+|++++.+|++++++|++|||++.| |+ T Consensus 1 m~~--i~~~~~--~~~~~~P~~~~~~~ag~Dl~~~----~~~~i~P~~~~lv~t~~~i~ip~~~~~~i~~RSsl~~~-g~ 71 (141) T 3c2t_A 1 MSS--LLVKKL--VESATTPMRGSEGAAGYDISSV----EDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYK-YG 71 (141) T ss_dssp CCS--CEEEES--STTCCCCEESSSSCCSEEEECS----SCEEECTTCEEEEECCEEEECCTTEEEEEECCHHHHHH-HC T ss_pred CCE--EEEEEC--CCCCCCCCCCCCCCEEEEEECC----HHCEECCCCEEEEEECCCCCCCCEEEEEEECCCCCEEE-CC T ss_conf 975--899988--9998788558999672793578----52098786289999064023362266665053322525-77 Q ss_pred ECCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 0235503665687887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 81 ACLNSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 81 ~~~n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) .+ +++|+||+||+|+|++.++|.++.++.|++|+||||++|.++..+.+++++ ++.+|+||++||||||| T Consensus 72 l~-~~~g~ID~gy~G~i~i~l~N~~~~~~~I~~g~riaQlv~~~~~~~~~~~~~--~~~~~~Rg~~gfGstG~ 141 (141) T 3c2t_A 72 ID-VLAGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVL--DLSDTARGSGGFGSTGI 141 (141) T ss_dssp EE-ECCCEECTTCCSCCEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCC--C---------------- T ss_pred EE-EEEEEECCCCCCEEEEEEECCCCCCEEEECCCEEEEEEEECCCCEEEEEEC--CCCCCCCCCCCCCCCCC T ss_conf 59-823597588883799999838997758767967899997055604899924--37875337898986889 No 3 >>2baz_A YOSS, hypothetical protein BSU20020; homotrimer, beta barrel, unknown function; 2.30A {Bacillus subtilis} (A:) Probab=100.00 E-value=2.1e-39 Score=243.90 Aligned_cols=139 Identities=30% Similarity=0.412 Sum_probs=121.9 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECC Q ss_conf 57899976754797037435788640878910377873893799739996586022587614678752663133222023 Q gi|254781025|r 4 IDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACL 83 (154) Q Consensus 4 ~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~ 83 (154) |+++|+++. ...+|.|++++|||||||++ ++++|+|+++++++|++++.+|+++++++++|||++.|..+.+. T Consensus 1 m~~~i~~~~---~~~~p~~~~~~~ag~Dl~~~----e~~~i~P~~~~li~t~~~~~~p~~~~~~i~~RSsl~~~g~l~~~ 73 (142) T 2baz_A 1 MQIKIKYLD---ETQTRINKMEQGDWIDLRAA----EDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQT 73 (142) T ss_dssp CEEEEEESS---TTSCCCTTCCSSSCEEEECS----SCEEECTTCEEEEECCEEEECCTTEEEEEEECTTHHHHHCEEET T ss_pred CEEEEEECC---CCCCCCCCCCCCCEEEEECC----CCEEECCCCEEEEECCCEEECCCCEEEEEEECCCEEEEEEEECC T ss_conf 978899879---88888763799966868608----89799999999997783796474317899970670156787324 Q ss_pred CCCEEECCCCCCCEEEEEE-ECCCCEEEEECCCCEEEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 5503665687887699999-8079449995595035899975043-40699871357754268888735467 Q gi|254781025|r 84 NSPGTIDSDYRGEIKILLI-NLGQENFLIMRGMRIAQLIIANSVR-AHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 84 n~~GvID~~YrGei~v~l~-N~~~~~~~i~~G~RIaQlv~~~~~~-~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) |++|+||+||+||+.+.++ |.++.++.|++|+||||+||.++.. +++.+ +.+++++.|| ||||||+ T Consensus 74 ~~~gviD~gy~G~i~~~l~~N~~~~~~~i~~G~rIaQlv~~~~~~~~~~~~--~~~~~~~~rg--gfGstG~ 141 (142) T 2baz_A 74 NSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIE--VDRLGNGDRG--GHGSTGT 141 (142) T ss_dssp TSSEEEETTCCCTTCCCEEEEEESSCEEECTTCEEEEEEEEECCCCCEEEE--CSCC--------------- T ss_pred CCCCEECCCCCCCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCEEE--CCCCCCCCCC--CCCCCCC T ss_conf 766567157578748998733788456987589898899864647642899--3636888857--0776751 No 4 >>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* (A:) Probab=100.00 E-value=1e-39 Score=245.67 Aligned_cols=145 Identities=41% Similarity=0.710 Sum_probs=126.9 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECC Q ss_conf 57899976754797037435788640878910377873893799739996586022587614678752663133222023 Q gi|254781025|r 4 IDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACL 83 (154) Q Consensus 4 ~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~ 83 (154) +++++.++ ++++.+|++++.+||||||++. |+++|+|++.++++|++++.+|++++++|++|||++.|..+++. T Consensus 23 l~l~~~~~--~~~~~~p~~~~~~~ag~Dl~~~----e~~~l~Pg~~~lv~t~e~i~ip~~~~~~i~~RSslar~g~~v~~ 96 (174) T 3hza_A 23 TTLAIVRL--DPGLPLPSRAHDGDAGVDLYSA----EDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIV 96 (174) T ss_dssp CCCEEEES--STTSCCCCCSSTTCSCEEEECS----SCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEET T ss_pred EEEEEEEC--CCCCCCCCCCCCCCEEEEEECC----CCEEECCCCEEEEECCCCHHHCCCCCEEEECCCCCCCEECEEEE T ss_conf 35889998--9998898788999589999717----21283666359998587011034410246336320205167982 Q ss_pred CCCEEECCCCCCCEEEEEEECCC-CEEEEECCCCEEEEEEEECCCCEEEEEECCC---CCCCCCCCCCCCCCCCC Q ss_conf 55036656878876999998079-4499955950358999750434069987135---77542688887354679 Q gi|254781025|r 84 NSPGTIDSDYRGEIKILLINLGQ-ENFLIMRGMRIAQLIIANSVRAHPSLISAMP---MGKNERNEKGFGSTGLY 154 (154) Q Consensus 84 n~~GvID~~YrGei~v~l~N~~~-~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~---l~~t~RG~~GFGSTG~~ 154 (154) +++|+||+||+|+|++.++|.++ .++.|++|+||||++|.++..+.+++++..+ ..+|+||++||||||++ T Consensus 97 ~~~gviD~gy~G~l~~~l~N~~~~~pv~I~~g~riaQlvf~~~~~~~~~~~~~~~~~~~~~t~rG~~GfGstg~~ 171 (174) T 3hza_A 97 NSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGWGSSGGH 171 (174) T ss_dssp TSSEEECTTCCSCCEEEEEECCSSCCEEECTTCEEEEEEEEECCCCCCCCCSCTTTTTCCCCSSTTCCTTTTCCS T ss_pred CCCCEECCCCCCEEEEEEEECCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 566375477653349999979988456874899488898712586249995634556777653368988757757 No 5 >>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A (A:) Probab=100.00 E-value=3.8e-39 Score=242.42 Aligned_cols=140 Identities=34% Similarity=0.559 Sum_probs=127.3 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECC Q ss_conf 57899976754797037435788640878910377873893799739996586022587614678752663133222023 Q gi|254781025|r 4 IDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACL 83 (154) Q Consensus 4 ~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~ 83 (154) +++++.++ ++++.+|+|+++++|||||++. ++++|+|++.++++|++++.+|+++++++.+|||++ ++|+.+ T Consensus 8 ~~l~~~~~--~~~~~~p~~~~~~~ag~Dl~~~----e~~~i~P~~~~lv~t~~~i~ip~~~~~~i~~RSsl~-~~gi~~- 79 (147) T 2ol1_A 8 SPVRFVKE--TNRAKSPTRQSPGAAGYDLYSA----YDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLS-LKGIDI- 79 (147) T ss_dssp CCEEEEES--STTCCCCBCCCTTCSSEEEECS----SCEEECTTEEEEEECCEEECCCTTEEEEEECCHHHH-TTTEEE- T ss_pred CEEEEEEC--CCCCCCCCCCCCCCEEEEEECC----CCEEECCCCCEEEECCCEECCCCCCCEEEEHHCCCC-EEEEEE- T ss_conf 64899988--8898897689998388899678----063986786489995732023543020011110100-058986- Q ss_pred CCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 55036656878876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 84 NSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 84 n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) ++|+||+||+|++++.++|.++.++.|++|+||||++|.++..+.+++++ ++..++||++||||||+. T Consensus 80 -~~g~iD~gy~G~i~i~l~N~~~~~~~i~~g~riaQlv~~~~~~~~~~~~~--~~~~~~Rg~~gfgstg~~ 147 (147) T 2ol1_A 80 -GGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQ--SLDSTNRGDQGFGSTGLR 147 (147) T ss_dssp -ECCEECTTCCSCCEEEEEECSSSCEEECTTCEEEEEEEEEEECCCEEECS--CC---------------- T ss_pred -EEEEECCCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCCCEEEEECC--CCCCCCCCCCCCCCCCCC T ss_conf -40788888886359999827983067508981799998366640699927--478775479988868729 No 6 >>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} (A:) Probab=100.00 E-value=5.7e-39 Score=241.37 Aligned_cols=132 Identities=30% Similarity=0.464 Sum_probs=122.4 Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCC Q ss_conf 47970374357886408789103778738937997399965860225876146787526631332220235503665687 Q gi|254781025|r 14 AHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDY 93 (154) Q Consensus 14 ~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~Y 93 (154) ++++.+|.+++.+||||||++. ++++|+|++.++|+|++++.+|++++++|++|||++ ++|+.+ ++|+||+|| T Consensus 3 ~~~~~~p~~~~~~~ag~Dl~~~----~~~~i~P~~~~lv~t~~~~~~p~~~~~~i~~RSsl~-~~gi~~--~~g~iDpgy 75 (134) T 1dun_A 3 AYQGTQIKEKRDEDAGFDLCVP----YDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMA-KQGLLI--NGGIIDEGY 75 (134) T ss_dssp EEECSSBCCCCTTCSSEEEECS----SCEEECTTCEEEEECCCEEECCTTEEEEEECCHHHH-HTTEEE--ECCEEETTC T ss_pred CCCCCCCCCCCCCCCCEEEECC----CCEEECCCCEEEEECCCEEECCCCCCCEEEECCCEE-ECCCCC--CCCEECCCC T ss_conf 4467756878867703589549----898989999899977878426860121253013322-217756--767866788 Q ss_pred CCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 8876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 94 RGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 94 rGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) +|||++.++|.++.++.|++|+||||++|.++..+.+++++ ++.+++||++|||||||| T Consensus 76 ~G~l~i~l~N~~~~~~~i~~g~~iaQlv~~~~~~~~~~~~~--~~~~~~Rg~~~fGstGi~ 134 (134) T 1dun_A 76 TGEIQVICTNIGKSNIKLIEGQKFAQLIILQHHSNSRQPWD--ENKISQRGDKGFGSTGVF 134 (134) T ss_dssp CSCCEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCC--TTCC-------------- T ss_pred CCCEEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEC--CCCCCCCCCCCCCCCCCC T ss_conf 89789999969963567379966678987545875699906--688350679979737699 No 7 >>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} (A:) Probab=100.00 E-value=1.5e-38 Score=239.04 Aligned_cols=131 Identities=34% Similarity=0.562 Sum_probs=121.0 Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCC Q ss_conf 54797037435788640878910377873893799739996586022587614678752663133222023550366568 Q gi|254781025|r 13 HAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSD 92 (154) Q Consensus 13 ~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~ 92 (154) .++++.+|+| ++||||||+++ ++++|+|+++++|+|++++.+|+++++++++|||++ ++|+.+ ++|+||+| T Consensus 3 ~~~~~~~P~~--~~~ag~Di~~~----~~i~i~p~~~~~v~t~~~~~~p~~~~~~i~~RSsl~-~~gi~v--~~g~iD~g 73 (136) T 1f7d_A 3 IEGDGILDKR--SEDAGYDLLAA----KEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIG-SKGLDV--LGGVIDEG 73 (136) T ss_dssp EESSSBCCCC--TTCSSEEEECS----SCEEECTTCEEEEECCCEECCCTTEEEEEECCHHHH-TTTEEE--ECCEECTT T ss_pred ECCCCCCCCC--CCCCCEEEECC----CCEEECCCCEEEEECCEEEECCCCEEEEEECCCCCC-CCCCEE--ECCEECCC T ss_conf 7488327786--88536728248----888999999899976969988999799996357545-379456--77879989 Q ss_pred CCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 78876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 93 YRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 93 YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) |+|++++.++|.++.++.|++|+||||++|.++..+.+++++ ++.+|+||++||||||++ T Consensus 74 y~G~i~i~l~N~~~~~~~i~~g~riaQlv~~~~~~~~~~~~~--~l~~t~Rg~~gfGstgv~ 133 (136) T 1f7d_A 74 YRGEIGVIMINVSRKSITLMERQKIAQLIILPCKHEVLEQGK--VVMDSERGDNGYGSTGVF 133 (136) T ss_dssp CCSCCEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCSC--CCC--------------- T ss_pred CCCCEEEEEECCCCCCEEECCCCEEEEEEEEECCCCEEEECC--CCCCCCCCCCCCCCCCCC T ss_conf 868679999808999989899998999999852411279826--567665768979724315 No 8 >>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A (A:) Probab=100.00 E-value=3e-38 Score=237.32 Aligned_cols=139 Identities=32% Similarity=0.475 Sum_probs=125.9 Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCC Q ss_conf 78999767547970374357886408789103778738937997399965860225876146787526631332220235 Q gi|254781025|r 5 DIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLN 84 (154) Q Consensus 5 ~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n 84 (154) .++++++ ++++.+|+|++.+||||||+++ ++++|+|+++++++|++++++|+++++++++|||++ ++|+.+. T Consensus 31 ~~~~~~~--~~~~~~p~~~~~~~ag~Dl~~~----e~~~i~P~~~~lv~t~e~v~ip~~~~~~i~~RSs~~-r~g~~~~- 102 (169) T 2p9o_A 31 FFKVKKL--SEKAVIPTRGSPLSAGYDLSSA----VDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLA-WKHSIDV- 102 (169) T ss_dssp CCEEEES--STTCCCCBCSSTTCSCEEEECS----SCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHH-HHHCEEE- T ss_pred EEEEEEC--CCCCCCCCCCCCCCCCEEECCC----CCCEECCCCEEEEECCCEEEECCCEEEEEEECCCCC-EEEEEEE- T ss_conf 3889988--9888688668999417897125----002795897699986747610342257776227762-0111676- Q ss_pred CCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 503665687887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 85 SPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 85 ~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) ++|+||+||+|+|++.++|.+..++.|++|+|||||+|.++..+.+++++ ++.+|+||++||||||| T Consensus 103 ~~g~iD~gy~G~i~l~l~N~~~~~~~i~~g~riaQlvf~~~~~~~~~~~~--~~~~~~Rg~~gfGstG~ 169 (169) T 2p9o_A 103 GAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVD--DLDETVRGDGGFGSTGV 169 (169) T ss_dssp ECCEEETTCCSCEEEEEEECSSSCEEECTTCEEEEEEEEEEECCCEEECS--CCCC------------- T ss_pred ECEEECCCCCEEEEEEEEECCCCCEEEECCCEEEEEEECCCCCEEEEECC--CCCCCCCCCCCCCCCCC T ss_conf 01061048744789999954666537606976899997364647899904--07987427998886889 No 9 >>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} (A:) Probab=100.00 E-value=3.3e-37 Score=231.34 Aligned_cols=133 Identities=29% Similarity=0.487 Sum_probs=121.7 Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCC Q ss_conf 54797037435788640878910377873893799739996586022587614678752663133222023550366568 Q gi|254781025|r 13 HAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSD 92 (154) Q Consensus 13 ~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~ 92 (154) ..+++.+|+|++++||||||+++ ++++|+|++.++++|++++++|+++++++++|||++. +|+... ++|+||+| T Consensus 27 ~~~~~~~p~~~~~~~a~~dl~~~----e~~~i~P~~~~li~t~~~i~~p~~~~~~i~~RSs~~~-~g~i~~-~~g~iD~g 100 (160) T 3ecy_A 27 LTENALEPVRGSAKAAGVDLRSA----YDVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAV-KNFIDV-GAGVVDED 100 (160) T ss_dssp SSTTCCCCCBCSTTCSSEEEECS----SCEEECTTCEEEEECCEEEECCTTCEEEEECC--------CEEE-ECEEECTT T ss_pred CCCCCCCCCCCCCCEEEEEEECC----CHHHCCCCCEEEEEECCEECCCCCEEEEEEECCCCEE-ECCCCC-CCCCCCCC T ss_conf 89998687568998498898557----1131688606999927770214201347870476214-346314-65525755 Q ss_pred CCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 7887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 93 YRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 93 YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) |+|||++.++|+++.++.|++|+||||++|.+...+.+++++ .+.+++||++||||||+ T Consensus 101 y~G~i~i~l~N~~~~~v~i~~g~ri~Qlv~~~~~~~~~~~~~--~~~~~~Rg~~gfgstg~ 159 (160) T 3ecy_A 101 YRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVMVD--KLEDTERGEAGFGSTGV 159 (160) T ss_dssp CCSCCEEEEEECSSSCEEECTTCEEEEEEEEEEECCEEEEES--CC--------------- T ss_pred CCCCCEEEEEECCCCEEECCCCCEEEEEEECCCCCEEEEEEC--CCCCCCCCCCCCCCCCC T ss_conf 565677999978873140379971577886145844899915--57866368898876871 No 10 >>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A (A:) Probab=100.00 E-value=8.1e-37 Score=229.15 Aligned_cols=137 Identities=28% Similarity=0.503 Sum_probs=121.3 Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCC Q ss_conf 89997675479703743578864087891037787389379973999658602258761467875266313322202355 Q gi|254781025|r 6 IPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNS 85 (154) Q Consensus 6 iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~ 85 (154) +++++. ++.+.+|+|.+.+||||||+++ ++++|+|+++++++|++++++|+++++++++|||++. +|+... + T Consensus 29 i~~~~~--~~~~~~p~~~~~~~~GyDi~~~----e~~~l~P~~~~li~t~e~i~~p~~~~~~i~~RSs~~~-~g~i~~-~ 100 (167) T 3f4f_A 29 LKIQLR--SASATVPTKGSATAAGYDIYAS----QDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAV-KNGIQT-G 100 (167) T ss_dssp EEEEEC--STTCCCCEECSTTCSEEEEECS----SCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHH-HHCEEE-E T ss_pred EEEEEC--CCCCCCCCCCCCCCCCEEEECC----CCCCCCCCCEEEEECCCEEECCCCCEEEEEECCCCCE-EEEEEC-C T ss_conf 899998--9999898247999757678837----5000399967999877343025541367851466200-343430-5 Q ss_pred CEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCC-EEEEEECCCCCCCCCCCCCCCCCC Q ss_conf 0366568788769999980794499955950358999750434-069987135775426888873546 Q gi|254781025|r 86 PGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRA-HPSLISAMPMGKNERNEKGFGSTG 152 (154) Q Consensus 86 ~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~-~~~~v~~~~l~~t~RG~~GFGSTG 152 (154) +|+||+||+|++++.++|.++.++.|++|+|||||+|.+...+ ++.. .+.++.+.||++|||||| T Consensus 101 ~g~iD~gy~G~i~v~l~N~~~~~~~i~~g~riaQlv~~~~~~~~~~~~--~~~~~~~yrg~~gfGStg 166 (167) T 3f4f_A 101 AGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEKIVDDAQIVV--VDSLEESARGAGGFGSTG 166 (167) T ss_dssp SCEECTTCCSCCEEEEEECSSSCEEECTTCEEEEEEEEEBCCSCEEEE--CSSCCCCSSBTCCCC--- T ss_pred CCCCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCEEEE--CCCCCCCCCCCCCCCCCC T ss_conf 534678861489999960565386996598579899823558845998--776887644689787898 No 11 >>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} (A:) Probab=100.00 E-value=3.8e-37 Score=230.98 Aligned_cols=140 Identities=31% Similarity=0.504 Sum_probs=125.8 Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCC Q ss_conf 78999767547970374357886408789103778738937997399965860225876146787526631332220235 Q gi|254781025|r 5 DIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLN 84 (154) Q Consensus 5 ~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n 84 (154) ++++.++ +.++.+|.+++.++|||||++. ++++|+|++.++++|++++++|+|+++++.+|||++ +.|+.+. T Consensus 19 ~l~~~~~--~~~~~~p~~~~~~~~~~Dl~~~----e~~~l~P~~~~lv~t~e~i~lP~~~~~~i~~RSsl~-r~g~~~~- 90 (165) T 3ca9_A 19 SLLVKKL--VESATTPMRGSEGAAGYDISSV----EDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLA-YKYGIDV- 90 (165) T ss_dssp SCEEEES--STTCCCCEESSSSCSSEEEECS----SCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHH-HHHCEEE- T ss_pred EEEEEEC--CCCCCCCCCCCCCCEEEEECCC----CCCCCCCCCEEEEECCCEECCCCCCEEEEECCCCCE-EECCEEE- T ss_conf 9999986--9898788558999576995468----200059997899983733047852115671443333-2578886- Q ss_pred CCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 5036656878876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 85 SPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 85 ~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) ++|+||+||+|+|.+.++|.++.++.|++|+||||++|.++..+.+++++ ++.+++||++||||||++ T Consensus 91 ~~g~iD~Gy~G~i~i~l~N~~~~~~~i~~g~riaQlvf~~~~~~~~~~~~--~~~~~~R~~~gfGstg~~ 158 (165) T 3ca9_A 91 LAGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVL--DLSDTARGSGGFGSTGIL 158 (165) T ss_dssp CCCEECTTCCSCCEEEEEECSSSCEEECTTCEEEEEEEEECCCCCCCCCC--C----------------- T ss_pred EEEEECCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCCEEEEEEC--CCCCCCCCCCCCCCCCCC T ss_conf 00587278872699998758897858776956899997056605899914--378764479988635887 No 12 >>3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} (A:) Probab=100.00 E-value=7.5e-36 Score=223.64 Aligned_cols=134 Identities=33% Similarity=0.529 Sum_probs=122.0 Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCC Q ss_conf 54797037435788640878910377873893799739996586022587614678752663133222023550366568 Q gi|254781025|r 13 HAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSD 92 (154) Q Consensus 13 ~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~ 92 (154) ..+++.+|.++++.++|||++++ ++++|+|++.++++|++++.+|+++++++++|||++ ++|+.+ +++|+||+| T Consensus 31 ~~~~~~lp~~~~~~~~g~di~~~----e~~~l~P~~~~li~t~e~i~~p~~~~~~i~~RSs~~-r~g~~~-~~~g~iD~g 104 (164) T 3ehw_A 31 LSEHATAPTRGSARAAGYDLYSA----YDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLA-AKHFID-VGAGVIDED 104 (164) T ss_dssp SSTTCCCCEESSTTCSEEEEECS----SCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHH-HHHCEE-EECCEECTT T ss_pred CCCCCCCCCCCCCCCEEEEEEEC----EEEEEECCCEEEEECCCEEEECCCEEEEEEECCCCC-CCCEEE-CCCEEECCC T ss_conf 99888787537999527999937----426993263899985847740551433454000034-444398-578788788 Q ss_pred CCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 78876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 93 YRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 93 YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) |+|++++.++|.++.++.|++|+||||++|.+...+.+++++ ++.+|+||++||||||+. T Consensus 105 y~G~i~~~l~N~~~~pv~I~~g~riaQlvf~~~~~~~~~~~~--~~~~~~Rg~~gfGstG~~ 164 (164) T 3ehw_A 105 YRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQ--ALDDTERGSGGFGSTGKN 164 (164) T ss_dssp BCSCCEEEEEECSSSCEEECTTCEEEEEEEEEBCCCCEEECS--CCCCCSSBTCCTTTTCCC T ss_pred CCCEEEEEEEEECCCCEEEEECCCEEEEEECCCCCEEEEEEC--CCCCCCCCCCCCCCCCCC T ss_conf 886148999972264508850872478997266866899953--168762568960778889 No 13 >>1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} (A:) Probab=100.00 E-value=1.4e-36 Score=227.87 Aligned_cols=141 Identities=22% Similarity=0.186 Sum_probs=126.0 Q ss_pred ECCCCCCCCCCCCCCCCCCEEEEEEEC---------------------CCCCCEEECCCCEEEEECCCHHHCCCCEEEEE Q ss_conf 767547970374357886408789103---------------------77873893799739996586022587614678 Q gi|254781025|r 10 QLPHAHGIPLPEYKTSGSSGMDLFAAL---------------------PEDEPVELLPGMRSLIPGGYIIAIPPGYEGQV 68 (154) Q Consensus 10 ~~~~~~~~~lP~~~t~~~AG~Dl~a~~---------------------~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i 68 (154) +-....++.+|++.+.++|||||++.- ..++.++|+|++.++++|++++++|+++++++ T Consensus 9 ~~~~~~~~~~~~~~~~~~~g~Dl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~lv~t~e~i~ip~~~~~~i 88 (173) T 1vyq_A 9 SDEVREMYKNHKTHHEGDSGLDLFIVKDEVLKPKSTTFVKLGIKAIALQYKSNYYYKCEKSENKKKDDDKSNIVNTSFLL 88 (173) T ss_dssp SHHHHHHHHTCTTCC--CCEEEECCCSCEEECTTEEEEEEEEEEEEEEECCCCC------------------CEECCEEE T ss_pred CHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEE T ss_conf 88786765543548999186999808785989998899968988589634776388852034444443333467715899 Q ss_pred EECCCCEEEEEEECCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC Q ss_conf 75266313322202355036656878876999998079449995595035899975043406998713577542688887 Q gi|254781025|r 69 RSRSGLALNYGVACLNSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGF 148 (154) Q Consensus 69 ~~RSsl~~K~gl~~~n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GF 148 (154) .+|||++ ++||.+.+++|+||+||+|+|++.++|.+..++.|++|+|||||+|.++..+.+++++ ++..++||++|| T Consensus 89 ~~RSsl~-r~Gl~v~~~~g~iD~gy~G~i~i~l~N~~~~~i~I~~G~riaQlvf~~~~~~~~~~~~--~~~~~~Rg~~gf 165 (173) T 1vyq_A 89 FPRSSIS-KTPLRLANSIGLIDAGYRGEIIAALDNTSDQEYHIKKNDKLVQLVSFTGEPLSFELVE--ELDETSRGEGGF 165 (173) T ss_dssp EECGGGG-GTTEEETTSSEEECTTCCSEEEEEEEECSSSCEEECTTCCCEEEECTTCCCCEEEECS--CCCCC------- T ss_pred ECCCCHH-CCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEEEECCCEEEEECC--CCCCCCCCCCCC T ss_conf 7778542-0756632631135776677249999967985799966986899997304852799955--278773479973 Q ss_pred CCCCC Q ss_conf 35467 Q gi|254781025|r 149 GSTGL 153 (154) Q Consensus 149 GSTG~ 153 (154) ||||+ T Consensus 166 GstG~ 170 (173) T 1vyq_A 166 GSTSN 170 (173) T ss_dssp ----- T ss_pred CCCCC T ss_conf 75887 No 14 >>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} (A:117-244) Probab=100.00 E-value=2e-35 Score=221.28 Aligned_cols=123 Identities=18% Similarity=0.219 Sum_probs=113.6 Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCC Q ss_conf 47970374357886408789103778738937997399965860225876146787526631332220235503665687 Q gi|254781025|r 14 AHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDY 93 (154) Q Consensus 14 ~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~Y 93 (154) ++++.||+|++++||||||++. ++++|+|++.++++|++++.+|++++++|.+|||++ ++|+++ +||+|| T Consensus 2 ~~~~~lp~~~~~~~aGyDl~~~----~~~~i~P~e~~~v~t~~~i~~p~~~~~~i~~RSsl~-~~gi~~-----~id~gy 71 (128) T 2bsy_A 2 EDKGPINHPQYPGDVGLDVSLP----KDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLA-MQGILV-----KPCRWR 71 (128) T ss_dssp ---CCBCCCSSTTCCCEEEECS----SCEEECTTCEEEEEECSCCCCCTTEEEEEECCHHHH-HTTEEE-----CCEECB T ss_pred CCCCCCCCCCCCCCEEEEEEEC----CEEEECCCCEEEEECCEEEECCCCEEEEEEECCCCC-CCCEEE-----ECCCEE T ss_conf 5766579986677526889958----739989998899878869876998499998376233-289798-----298100 Q ss_pred CCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 94 RGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 94 rGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) +||+++.++|+++.++.|++|+|||||||.+...+ .++..|+||++||||||+ T Consensus 72 ~G~i~i~l~N~~~~~~~I~~g~riaQlv~~~~~~~-------~~~~~t~rG~~~fgstg~ 124 (128) T 2bsy_A 72 RGGVDVSLTNFSDQTVFLNKYRRFCQLVYLHKHHL-------TSFYSPHSDAGVLGPRSL 124 (128) T ss_dssp TTBEEEEEEECSSSCEEECTTCEEEEEEEEEGGGE-------ESCCSTTEETTTTCSSSE T ss_pred CCEEEEEEEECCCCCEEECCCCEEEEEEEEECCCC-------CCCCCCCCCCCCCCCCCC T ss_conf 67899999989898589789997999999624445-------422233333333343334 No 15 >>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A* (A:) Probab=100.00 E-value=1.1e-34 Score=217.01 Aligned_cols=133 Identities=23% Similarity=0.319 Sum_probs=122.6 Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECC Q ss_conf 75479703743578864087891037787389379973999658602258761467875266313322202355036656 Q gi|254781025|r 12 PHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDS 91 (154) Q Consensus 12 ~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~ 91 (154) .....+.+|.++++.||||||++ +++++|+|++.++++|++.+.+|++++++++||||++ |+|+.+.++.|+||+ T Consensus 46 ~~~~~~~~~~~~~~~~~g~dl~~----~~~~~l~P~~~~lv~t~e~i~~p~~~~~~i~~RSsl~-r~Gl~v~~t~g~iDp 120 (190) T 2qxx_A 46 TRYTHIDPAKQQDELTSLVQPVD----GEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLG-RLGLLTHSTAGFIDP 120 (190) T ss_dssp SSCSCCCTTSCCGGGSEEECCCT----TCCEEECTTCEEEEEBSSEEECCTTEEEEEECCHHHH-TTTEEECCTTCEECT T ss_pred CCCCCCCCCHHCCCCCCCEEEEC----CCCEEEECCEEEEEEEEHHHCCCCHHHHHHHCCCHHH-HHCCCCCCCCCCCCC T ss_conf 56776561010122200016503----5626861465999985032105734543101442255-422332124776589 Q ss_pred CCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 878876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 92 DYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 92 ~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) ||+|++++.++|.++.++.|++|+||||++|.++..+. +.+++++.||++||||||+. T Consensus 121 gy~G~l~l~i~N~~~~~i~i~~G~riaQlvf~~~~~~~-----~~~y~~~~rg~~y~gstgv~ 178 (190) T 2qxx_A 121 GFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPS-----EHPYGSSRAGSKYQGQRGPT 178 (190) T ss_dssp TCEECCEEEEEECSSSCEEECTTSEEEEEEEEECSSCC-----SSCTTSGGGTCSCTTCCSCC T ss_pred CCCCEEEEEEEECCCEEEEEECCCEEEEEEEEECCCCC-----CCCCCCCCCCCCCCCCCCCC T ss_conf 98765899999566448999449889889999756886-----32432354688888888986 No 16 >>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} (A:) Probab=100.00 E-value=8.2e-36 Score=223.42 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=122.3 Q ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCE Q ss_conf 99767547970374357886408789103778738937997399965860225876146787526631332220235503 Q gi|254781025|r 8 FLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPG 87 (154) Q Consensus 8 i~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~G 87 (154) ++......++.+|++++.+||||||++ +++++|+|++.++++|++++.+|+++++++.+|||++ |+|+.+.+++| T Consensus 51 ~~~~~~~~~~~~p~~~~~~~ag~Dl~~----~~~~~l~P~~~~lv~t~e~i~ip~~~~~~i~~RSsl~-r~Gl~i~~t~g 125 (193) T 1xs1_A 51 FIDLSGPKDEVSAALDRVMSDEIVLDE----GEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLA-RLGLMVHVTAH 125 (193) T ss_dssp CEETTSCHHHHHHHHHHHBCCCEECCT----TCCEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHH-TTTEESCSSCC T ss_pred CCCCCCCCCCHHHHHHHCCCCEEEECC----CCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCHH-HHCEEEECCCE T ss_conf 246667763001122100220355057----8619972898999998888755865389998337344-30324641310 Q ss_pred EECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 6656878876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 88 TIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 88 vID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) +||+||+|++.+.++|.++.++.|++|+|||||+|.+...+ ...+..+.||.+||||||+. T Consensus 126 ~iD~gy~G~i~l~i~N~~~~~i~i~~G~riaQlvf~~~~~~------~~~~~~~~r~~~y~Gs~gv~ 186 (193) T 1xs1_A 126 RIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGP------AVRPYNRREDAKYRNQQGAV 186 (193) T ss_dssp EECTTCEEEEEEEEEECSSSCEEECTTSEEEEEEEEECSSC------CSSCGGGCTTCSCSSBCSCC T ss_pred ECCCCCCCCEEEEEEECCCCEEEECCCCEEEEEEEEECCCC------CCCCCCCCCCCCCCCCCCCC T ss_conf 11766676179999958851589679999989999988887------54335777798678988987 No 17 >>2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* (A:) Probab=100.00 E-value=3.6e-34 Score=214.09 Aligned_cols=129 Identities=30% Similarity=0.475 Sum_probs=114.9 Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCC-CEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEEC Q ss_conf 754797037435788640878910377873893799-7399965860225876146787526631332220235503665 Q gi|254781025|r 12 PHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPG-MRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTID 90 (154) Q Consensus 12 ~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg-~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID 90 (154) ...+++.+|+++++.||||||+++ +++.|.|. +.++++|++++++|++++++|.+|||++ ++|+.+ .+|+|| T Consensus 23 ~~~~~~~~p~~~~~~~ag~Dl~~~----~~~~i~p~~~~~lv~t~e~i~lp~~~~~~i~~RSsl~-r~g~~~--~~g~id 95 (152) T 2d4n_A 23 QQKQPISKLTRATPGSAGLDLCST----SHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSIT-MKGLQV--YPGVID 95 (152) T ss_dssp --CEEGGGCCCSSTTCSSEEEECS----SCEEECGGGCCEEEEEEEECCCCTTEEEEEECCHHHH-HTTEEE--CCEEEC T ss_pred CCCCCCCCCCCCCCCCEEEEECCC----CCCEECCCCEEEEEEECCEECCCCCEEEEEEECCHHH-EEECCC--CCCEEC T ss_conf 567898877768996021245268----7988878983689775530024650466655101011-023011--112580 Q ss_pred CCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC Q ss_conf 6878876999998079449995595035899975043406998713577542688887354679 Q gi|254781025|r 91 SDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGLY 154 (154) Q Consensus 91 ~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~~ 154 (154) +||+|++++.+.|. +.++.|++|+|||||||.++... ++++..|+||++||||||+| T Consensus 96 ~gy~G~i~i~l~n~-~~~~~i~~G~riaQlvf~~~~~~------~~~~~~~~rg~~~fGstGv~ 152 (152) T 2d4n_A 96 NDYTGEIKIMAKAV-NNIVTVSQGNRIAQLILLPLIET------DNKVQQPYRGQGSFGSSDIY 152 (152) T ss_dssp TTCCSEEEEEEEEC-SSCEEECTTCEEEEEEEEECCCC------CCCCC--------------- T ss_pred CCCCCCEEEEEECC-CCEEEECCCCEEEEEEEEEEEEE------CCCCCCCCCCCCCCCCCCCC T ss_conf 48877357656336-52499827989999998702688------04226665789989757789 No 18 >>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} (A:) Probab=100.00 E-value=2.2e-35 Score=220.97 Aligned_cols=137 Identities=15% Similarity=0.178 Sum_probs=124.6 Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCC Q ss_conf 78999767547970374357886408789103778738937997399965860225876146787526631332220235 Q gi|254781025|r 5 DIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLN 84 (154) Q Consensus 5 ~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n 84 (154) ..+..+..+++.+.+|+|+++++|||||++. ++++|+|++.++++|++++.+|+++++++++|||++ |+||.+.+ T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~ag~Dl~~~----~~~~l~P~~~~lv~t~e~i~lp~~~~~~i~~RSsla-r~Gl~v~~ 129 (204) T 1pkh_A 55 NYKRIKIKNSILVCPLNYNLTEEKINYFKEK----YNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLG-RVFLTSHQ 129 (204) T ss_dssp CEEEEECSSEEEEECTTCCCCHHHHHHHHHH----HCCSEEEESCEEEEEEEEEECCTTEEEEEEECHHHH-TTTEESCS T ss_pred CCCCCCCCCCEEECCCCCCCCCCCEEEECCC----CCCEECCCCCEEEEEEEEEECCCCEEEEEECCCHHH-HCCCCCCC T ss_conf 5000146654465465333453210220146----673141587189998889953885389998134186-57811114 Q ss_pred CCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 503665687887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 85 SPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 85 ~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) ++|+||+||+|++++.++|.++ ++.|++|+|||||||.+...+ .+++..|.||.+||||||+ T Consensus 130 t~g~iD~gy~G~i~l~l~N~~~-pv~i~~g~riaQlvf~~~~~~------~~~~~~~~rg~~y~Gstgv 191 (204) T 1pkh_A 130 TAGWIDAGFKGKITLEIVAFDK-PVILYKNQRIGQLIFSKLLSP------ADVGYSERKTSKYAYQKSV 191 (204) T ss_dssp SCCEECTTCEEEEEEEEEESSS-CEEEETTCEEEEEEEEECSSC------CCCSEEEECC--------- T ss_pred CCCCCCCCCCCEEEEEEEECCC-CEEEECCCEEEEEEEEECCCC------CCCCCCCCCCCCCCCCCCC T ss_conf 4642888966679999997898-989838998999999977777------5666555558704788998 No 19 >>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ} (A:) Probab=99.97 E-value=4.2e-32 Score=202.35 Aligned_cols=127 Identities=11% Similarity=0.062 Sum_probs=115.7 Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCC Q ss_conf 54797037435788640878910377873893799739996586022587614678752663133222023550366568 Q gi|254781025|r 13 HAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSD 92 (154) Q Consensus 13 ~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~ 92 (154) ..+.+.+|.+++..+++||+++. ++++|+|++.++++|++++.+|++++++|++|||++ ++|+.+ ++|+||+| T Consensus 74 ~~~~~~~~~~~~~~~~~~dl~~~----~~~~L~Pg~~~lv~t~e~i~ip~~~~~~i~~RSsl~-r~gl~~--~~g~iDpg 146 (206) T 3km3_A 74 ANTHSVVVDPKNFSQDSFVDREG----DFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYA-RCGIVV--NVTPLEPG 146 (206) T ss_dssp CCTTCCCCBTTBCCGGGEEEEES----SEEEECTTEEEEEEEEEEEECCTTEEEEEECCHHHH-TTTEEE--CCCCBCTT T ss_pred ECCCCCCCCCCCCCCCCCCCCCC----CCEEEECCCEEEEEEEEEEECCCCEEEEEEEECHHH-CEEEEE--CCCEECCC T ss_conf 04667756831012000123678----833786163899998316770897889997011010-410755--36517487 Q ss_pred CCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 7887699999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 93 YRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 93 YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) |+|++++.++|.++.++.|++|+||||++|.+...+ .++..++||.+||||||+ T Consensus 147 y~G~i~l~l~N~~~~~v~I~~G~rIaQLvf~~~~~~-------~~~~~~~r~~~y~Gstg~ 200 (206) T 3km3_A 147 WSGYVTLEFSNTSPLPVKVYAFEGACQFLFFSGKER-------CSKSYDEAGGKYMGQSDV 200 (206) T ss_dssp CEEEEEEEEEECSSSCEEEETTSEEEEEEEEEC---------------------------- T ss_pred CEEEEEEEEEECCCCCEEEECCCEEEEEEEEECCCC-------CCCCCCCCCCCCCCCCCC T ss_conf 337899999964787779817990999999977887-------666666679866999888 No 20 >>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} (A:175-370) Probab=99.97 E-value=8e-31 Score=195.05 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=108.0 Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCCC Q ss_conf 79703743578864087891037787389379973999658602258761467875266313322202355036656878 Q gi|254781025|r 15 HGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDYR 94 (154) Q Consensus 15 ~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~Yr 94 (154) .+...|.++++.+||||+++ ++.++|+|+++++++|++++++|+++++++.+|||++ +.||.+ ++|+||+||+ T Consensus 56 ~~~~~~~~~~~~~~~~d~~~----~~~~~L~P~~~~lv~t~e~i~lp~~~~~~i~~RSsl~-~~gi~~--~~gviD~gy~ 128 (196) T 2r9q_A 56 VDKKAQHDVLDFWEPLFARG----RAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLV-GEFRVH--YAGFFDPGFG 128 (196) T ss_dssp TTCGGGSCGGGTEEEEECCS----SSEEEECTTCCEEEEEEEEECCCTTEEEEEEECGGGT-TTEEEE--SCCEECTTTT T ss_pred ECCCCCCCHHHHHEEEEECC----CCEEEEECCCEEEEEEEEEEECCCCEEEEEEEECHHH-CCEEEE--CCCCCCCCCC T ss_conf 15645346878410575068----9669993594899999996617876489998324200-767886--4554758987 Q ss_pred CCEEE-------EEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 87699-------999807944999559503589997504340699871357754268888735467 Q gi|254781025|r 95 GEIKI-------LLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFGSTGL 153 (154) Q Consensus 95 Gei~v-------~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFGSTG~ 153 (154) |++++ .++|.++.++.|++|+||||+||.++..+ ++.+.+++|| +||||||+ T Consensus 129 G~i~~~~~~~~~l~~N~~~~~~~I~~G~riaQlvf~~~~~~------~~~~~~~~r~-g~y~~~g~ 187 (196) T 2r9q_A 129 HAQAGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYEHMLEK------PEGLYGTGLG-SNYQAQGL 187 (196) T ss_dssp C-----CCEEEEEEEEECSSCEEEETTCEEEEEEEEEBSSC------CC----------------- T ss_pred CCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEEECCCC------CCCCCCCCCC-CCCCCCCC T ss_conf 65566777559999955889869728999999999987887------5444477667-75467788 No 21 >>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A (A:) Probab=99.96 E-value=3.5e-29 Score=185.71 Aligned_cols=130 Identities=16% Similarity=0.158 Sum_probs=112.0 Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECC Q ss_conf 57899976754797037435788640878910377873893799739996586022587614678752663133222023 Q gi|254781025|r 4 IDIPFLQLPHAHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACL 83 (154) Q Consensus 4 ~~iki~~~~~~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~ 83 (154) +++++........+..|.++++.++|+|+++ +++++|.|++.++++|++++.+|+++++++.+|||++ ++|+.+ T Consensus 39 ~dl~l~~~~~~~~~~~~~~~~~~~~~~dl~~----~e~~~l~P~~~~lv~t~e~i~~p~~~~~~i~~RSsl~-r~Gi~v- 112 (169) T 2yzj_A 39 YDLRICGDKYYELVQGAELPEKKATLREIEF----KERAILSANHTYLFESCEEFNXPADLAVLITLKSTLA-RNGFLA- 112 (169) T ss_dssp EEEEEEEEEEEEEEECCEETTBCCEEEEEEC----SSEEEECTTEEEEEEEEEEEECCTTEEEEEEECHHHH-TTTEEC- T ss_pred EEEEECCEEEEEECCCCCCCCCCCCEEEECC----CCEEEECCCCEEEEEECCEEECCCCEEEEEEECCCCC-CCCCCC- T ss_conf 9999118499971486426776553479768----9839977992899998118983898899999578644-347612- Q ss_pred CCCEEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC Q ss_conf 550366568788769999980794499955950358999750434069987135775426888873 Q gi|254781025|r 84 NSPGTIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFG 149 (154) Q Consensus 84 n~~GvID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFG 149 (154) ++|+||+||+|+|++.++|. .++.|++|+||||++|.++..+ .++..|.|+.+||| T Consensus 113 -~~g~iD~gy~G~i~i~l~n~--~pi~i~~G~riaQlvf~~~~~~-------~~~~~s~ry~gg~G 168 (169) T 2yzj_A 113 -PPTVIDAGYKGKVNVAITAV--YNSSLKKGXATHHLIFLKLDKP-------TERLYNGKYQGGIL 168 (169) T ss_dssp -CCEEECTTCEEEEEEEEEES--SSEEEETTCEEEEEEEEECSSC-------CSSCCCSTTTTTCC T ss_pred -CCEECCCCCCCEEEEEEEEC--CCCEEECCCEEEEEEEEECCCC-------CCCCCCCCCCCCEE T ss_conf -33041899556499999927--6522808998999999977677-------66784889168563 No 22 >>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} (A:1-174) Probab=99.92 E-value=2.6e-25 Score=163.71 Aligned_cols=108 Identities=14% Similarity=0.093 Sum_probs=95.4 Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCC------CCE Q ss_conf 47970374357886408789103778738937997399965860225876146787526631332220235------503 Q gi|254781025|r 14 AHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLN------SPG 87 (154) Q Consensus 14 ~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n------~~G 87 (154) ...++.|.+.++.++|||+++. +.++|+|++.++++|++++++|+++++++.+|||++ ++|+.+.+ +.| T Consensus 60 ~~~~~~~~~~~~~~~~~di~~~----~~~~l~Pg~~~lv~t~e~i~iP~~~~~~i~~RSsla-r~g~~v~~t~~~~~~~g 134 (174) T 2r9q_A 60 PGPGTRVIDKLNRFSLHEVDLS----QGAVLETGCVYIVPLMESLALPADMSASANPKSSTG-RLDIFTRVMTDNAQEFD 134 (174) T ss_dssp CCTTCCHHHHHHHC-CEEEECS----SCEEECTTCEEEEEEEEEEECCTTEEEEEEECHHHH-TTTEEEEEEETTCSSTT T ss_pred CCCCCCCCCCCCCCEEEEEECC----CCEEEEECEEEEEEEEEEEECCCCCEEEEECCCCHH-HCCEEEEECCCCCCCCC T ss_conf 7899830012123337998268----874985040899998889977988379997345231-05078753236774466 Q ss_pred EECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEEECCC Q ss_conf 6656878876999998079449995595035899975043 Q gi|254781025|r 88 TIDSDYRGEIKILLINLGQENFLIMRGMRIAQLIIANSVR 127 (154) Q Consensus 88 vID~~YrGei~v~l~N~~~~~~~i~~G~RIaQlv~~~~~~ 127 (154) +||+||+|++++.+.|. ..++.|++|+||||++|.++.. T Consensus 135 ~iDpgy~G~i~l~i~N~-~~pv~I~~G~riaQlvf~~~~~ 173 (174) T 2r9q_A 135 KIPAGYTGPLYLEISPR-TFPIVVRRGSRLSQIRFRIGHA 173 (174) T ss_dssp EECTTCEEEEEEEEEES-SSCEEECTTCEEEEEEEEESCC T ss_pred CCCCCCCEEEEEEEECC-CCCEEEECCCEEEEEEEECCCC T ss_conf 44646440499999269-8788996577056786415887 No 23 >>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} (A:1-116,A:245-278) Probab=98.98 E-value=4.9e-09 Score=71.14 Aligned_cols=127 Identities=20% Similarity=0.324 Sum_probs=89.9 Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEECCCC Q ss_conf 47970374357886408789103778738937997399965860225876146787526631332220235503665687 Q gi|254781025|r 14 AHGIPLPEYKTSGSSGMDLFAALPEDEPVELLPGMRSLIPGGYIIAIPPGYEGQVRSRSGLALNYGVACLNSPGTIDSDY 93 (154) Q Consensus 14 ~~~~~lP~~~t~~~AG~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~ip~g~~~~i~~RSsl~~K~gl~~~n~~GvID~~Y 93 (154) ++.+ |-+.++-+- +.|. +...+.+.|.+.+.++.|+....|+|+-.++|.-.|- . +..++|+||+|| T Consensus 13 ndkl-llqqasvgr--ltlv----nkttillrpmktttvdlglyarppeghglmlwgstsr----p--vtshvgiidpgy 79 (150) T 2bsy_A 13 NDKL-LLQQASVGR--LTLV----NKTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSR----P--VTSHVGIIDPGY 79 (150) T ss_dssp CTTE-EEEEEETTE--EEEE----ESSCEEECTTSEEEEEEEEEEECCTTEEEEEEEECSS----S--EEECCEEECTTC T ss_pred CCCE-EECCCCCCC--EEEE----CCCCEEECCCCEEEECCCEEEECCCCEEEEEECCCCC----C--EECCCCEECCCC T ss_conf 8410-434686478--6774----8999898899807953885997899908999747789----7--314654017888 Q ss_pred CCCEEEEEEECCCCEEEEECCC-CEEEEEE---EECCCCEEEEEECCCCCC-------CCCCCCCCCCCCC Q ss_conf 8876999998079449995595-0358999---750434069987135775-------4268888735467 Q gi|254781025|r 94 RGEIKILLINLGQENFLIMRGM-RIAQLII---ANSVRAHPSLISAMPMGK-------NERNEKGFGSTGL 153 (154) Q Consensus 94 rGei~v~l~N~~~~~~~i~~G~-RIaQlv~---~~~~~~~~~~v~~~~l~~-------t~RG~~GFGSTG~ 153 (154) .||+.+++.|-..-+-++.+-+ ||.=+-| .|...+.|+++.+..+.+ .-|-..||||||. T Consensus 80 tgelrlilqnqrrynstlrp~~LKVSLlAF~YAvPiLsc~fee~p~la~g~~gl~~alegr~~rgfgssgq 150 (150) T 2bsy_A 80 TGELRLILQNQRRYNSTLRPSELKIHLAAFRYATPQMSCTFEEVPSLAMGDSGLSEALEGRQGRGFGSSGQ 150 (150) T ss_dssp CSCEEEEEEESSSSCEEECTTSCEEEEEEEEEECCCCCCCEEECGGGCC---------------------- T ss_pred CCEEEEEEEECCCCCEEECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 74379999968998678769968999988760277211224881310013334468867766998988999 No 24 >>3gzu_A Inner capsid protein VP2; 7RP, DLP, metal- binding, virion, zinc, core protein, RNA-binding, icosaderal virus; 3.80A {Rotavirus A} (A:38-101,A:593-752) Probab=42.67 E-value=8.9 Score=18.50 Aligned_cols=39 Identities=21% Similarity=0.045 Sum_probs=25.2 Q ss_pred EECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC Q ss_conf 955950358999750434069987135775426888873 Q gi|254781025|r 111 IMRGMRIAQLIIANSVRAHPSLISAMPMGKNERNEKGFG 149 (154) Q Consensus 111 i~~G~RIaQlv~~~~~~~~~~~v~~~~l~~t~RG~~GFG 149 (154) -+..|||||.|+..+.....+-++.--+-.-.|...||- T Consensus 85 EraSd~iaQGViiaYr~M~L~~dE~yG~vN~ar~~~GfQ 123 (224) T 3gzu_A 85 ERASDKIAQGVIIAYRDMQLERDEMYGYVNIARNLDGFQ 123 (224) T ss_dssp HHSSSSCCCEEEECSSCBCCCCCSSSCSCSEESSCCSSC T ss_pred HHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCE T ss_conf 877887642258962567630776513544420577412 No 25 >>1uwf_A FIMH protein, FIMH; bacterial adhesin, carbohydrate recognition, adherence to mammalian cells, IG-variable fold, cell adhesion; HET: DEG; 1.69A {Escherichia coli} (A:) Probab=23.83 E-value=50 Score=14.25 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=52.9 Q ss_pred EEEEEEECCCCCCEEECCCCEEEEECCCHHHC----CCCEEEEEEECCCCE-------EEEEEEC---------CCCCEE Q ss_conf 08789103778738937997399965860225----876146787526631-------3322202---------355036 Q gi|254781025|r 29 GMDLFAALPEDEPVELLPGMRSLIPGGYIIAI----PPGYEGQVRSRSGLA-------LNYGVAC---------LNSPGT 88 (154) Q Consensus 29 G~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~i----p~g~~~~i~~RSsl~-------~K~gl~~---------~n~~Gv 88 (154) -.++|.. -.-.+.+++...++.+-.+.+ |.-+.=.+..+++-+ ++-++.. .+..-+ T Consensus 17 ~a~v~Vn----l~p~v~~gqnlVvDlsq~i~C~ND~p~~~~Dy~~l~~gsa~gg~l~~f~gsl~~~G~~Y~~Pl~~~t~~ 92 (158) T 1uwf_A 17 SANVYVN----LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPR 92 (158) T ss_dssp EEEEEEC----CCSBCCTTSCEEEEGGGTEEEECSCTTTCCEEEEEEEEEECHHHHHHEEEEEEETTEEEEESCSSCCCC T ss_pred CEEEEEE----EEEEECCCCEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCEECCCCCCCCCE T ss_conf 1679994----016764892499971518997379998037889961166567523034542798687814544787418 Q ss_pred EC---CCCCC-CEEEEEEECCC-CEEEEECCCCEEEEEEEECCC Q ss_conf 65---68788-76999998079-449995595035899975043 Q gi|254781025|r 89 ID---SDYRG-EIKILLINLGQ-ENFLIMRGMRIAQLIIANSVR 127 (154) Q Consensus 89 ID---~~YrG-ei~v~l~N~~~-~~~~i~~G~RIaQlv~~~~~~ 127 (154) ++ -.|.. .+++-|++.+. -.+.|++||.||+|.+.+... T Consensus 93 ~~~~~~~~~P~p~~lYLtp~~~a~gV~I~~G~~ia~l~l~kt~~ 136 (158) T 1uwf_A 93 VVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNN 136 (158) T ss_dssp EEECCSSCEECCEEEEEEECTTCCEEEECTTCEEEEEEEEEEES T ss_pred EECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEEEECCC T ss_conf 98368997542038999756988867986698899999996078 No 26 >>1klf_B FIMH protein, FIMH adhesin; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} (B:1-159) Probab=22.99 E-value=52 Score=14.15 Aligned_cols=95 Identities=15% Similarity=0.139 Sum_probs=52.4 Q ss_pred EEEEEEECCCCCCEEECCCCEEEEECCCHHHC----CCCEEEEEEECCCCE-------EEEEEEC---------CCCCEE Q ss_conf 08789103778738937997399965860225----876146787526631-------3322202---------355036 Q gi|254781025|r 29 GMDLFAALPEDEPVELLPGMRSLIPGGYIIAI----PPGYEGQVRSRSGLA-------LNYGVAC---------LNSPGT 88 (154) Q Consensus 29 G~Dl~a~~~~~e~~~i~pg~~~li~Tgi~i~i----p~g~~~~i~~RSsl~-------~K~gl~~---------~n~~Gv 88 (154) -.++|.. -.-.+.+++...++.+-.+.+ |.-+.=.+..+++-+ ++-++.. .+..-+ T Consensus 17 ~a~v~Vn----l~p~v~~gqnlVvDlsq~i~C~ND~p~~~~Dy~~l~~gsa~gg~l~~f~gsl~~~g~~Y~~Pl~~~t~~ 92 (159) T 1klf_B 17 SANVYVN----LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPR 92 (159) T ss_dssp EEEEEEC----CCSBCCTTSCEEEEGGGTEEEECSSTTTCCEEEEEEEEEECHHHHHHEEEEEEETTEEEEESCCSCCCC T ss_pred CEEEEEE----CCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCEECCEEEEEEEEECCCCCCCCE T ss_conf 0799971----265666582599954760380489997368867000066446643315412688605950213688603 Q ss_pred ECCC---CCC-CEEEEEEECCC-CEEEEECCCCEEEEEEEECCC Q ss_conf 6568---788-76999998079-449995595035899975043 Q gi|254781025|r 89 IDSD---YRG-EIKILLINLGQ-ENFLIMRGMRIAQLIIANSVR 127 (154) Q Consensus 89 ID~~---YrG-ei~v~l~N~~~-~~~~i~~G~RIaQlv~~~~~~ 127 (154) ++-. |.. .+++-|++.+. -.+.|++||.||+|.+.+... T Consensus 93 ~~~~~~~~~P~p~~lYL~p~~~a~gv~I~~G~~iatl~l~kt~~ 136 (159) T 1klf_B 93 VVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNN 136 (159) T ss_dssp EEECCSSCEECCEEEEEEECTTCCSEEECTTCEEEEEEEEEEES T ss_pred EEECCCCCCCEEEEEEEECCCCCCCEECCCCCEEEEEEEECCCC T ss_conf 68568988752689999357777862126776799998401265 Done!