HHsearch alignment for GI: 254781026 and conserved domain: CHL00195

>CHL00195 ycf46 Ycf46; Provisional.
Probab=98.88  E-value=6.1e-09  Score=73.23  Aligned_cols=112  Identities=18%  Similarity=0.214  Sum_probs=64.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHH--HH
Q ss_conf             9777860599999998874889897885323000000278887565311120203775210011023434568279--98
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGE--DS   78 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~--i~   78 (186)
T Consensus       264 L~GpPG~GKtl~AKAvA~e~~-----------------------~------p~l~l~~~~l~~~~vGesE~~~r~~f~~A  314 (491)
T CHL00195        264 LVGIQGTGKSLTAKAIANEWN-----------------------L------PLLRLDVGKLFGGIVGESESRMRQMIQLA  314 (491)
T ss_pred             EECCCCCCHHHHHHHHHHHHC-----------------------C------CEEEEEHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             979999878999999986638-----------------------9------46996679975600670499999999999


Q ss_pred             HC-CCCEEEEECHHHC------------CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf             27-9988998038785------------9889999999997195230100307898470156752274658878898876
Q gi|254781026|r   79 LA-HNGVLFLDEIPEF------------SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENV  145 (186)
Q Consensus        79 lA-h~GVLflDE~~e~------------~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~  145 (186)
T Consensus       315 ~~~aP~ilfiDEidk~~~~~~~~~d~g~s~rv~~~~Lt~m~e~~-------------~~VfViattN~~~----------  371 (491)
T CHL00195        315 ETISPCILWIDEIDKAFSGLDSKGDSGTSNRVLATFITWLSEKK-------------SPVFVVATANNID----------  371 (491)
T ss_pred             HHHCCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC-------------CCEEEEEECCCCC----------
T ss_conf             86198589974654542588888887232899999999864689-------------9769999589975----------


Q ss_pred             CCCCHHHHHHHHHHCCHHHHH--CCCEEEECCCC
Q ss_conf             438999999998512243210--04259983885
Q gi|254781026|r  146 CIRGPRCATEYQARISGPLMD--RIDIRIAVPSR  177 (186)
Q Consensus       146 c~c~~~~~~~Y~~rls~plld--R~Dl~v~~~~~  177 (186)
T Consensus       372 -------------~L~pellR~GRFD~~~~v~lP  392 (491)
T CHL00195        372 -------------SLPLELLRKGRFDEIFFLDLP  392 (491)
T ss_pred             -------------CCCHHHCCCCCCCEEEECCCC
T ss_conf             -------------589877089877704764895