HHsearch alignment for GI: 254781026 and conserved domain: COG0470
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=97.66 E-value=0.00014 Score=47.71 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=42.3
Q ss_pred HCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 27998899803878598899999999971952301003078984701567522746588788988764389999999985
Q gi|254781026|r 79 LAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQA 158 (186)
Q Consensus 79 lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~ 158 (186)
T Consensus 107 ~~~~kviiidead~mt~~A~nallk~lEep~~~-----------~~~il~~n-~~------------------------~ 150 (325)
T COG0470 107 EGGYKVVIIDEADKLTEDAANALLKTLEEPPKN-----------TRFILITN-DP------------------------S 150 (325)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC-----------EEEEEEEC-CH------------------------H
T ss_conf 677269997320326988887675433248887-----------16999749-85------------------------5
Q ss_pred HCCHHHHHCCCEEEEC
Q ss_conf 1224321004259983
Q gi|254781026|r 159 RISGPLMDRIDIRIAV 174 (186)
Q Consensus 159 rls~plldR~Dl~v~~ 174 (186)
T Consensus 151 ~il~tI~SRc~~i~f~ 166 (325)
T COG0470 151 KILPTIRSRCQRIRFK 166 (325)
T ss_pred HCHHHHHHHEEEEECC
T ss_conf 5647877560788767