HHsearch alignment for GI: 254781026 and conserved domain: COG0488
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].
Probab=95.58 E-value=0.0055 Score=38.30 Aligned_cols=110 Identities=25% Similarity=0.281 Sum_probs=57.0
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH-HCEEECCC---CCCCCCCCC-------------------CCCEEECCC
Q ss_conf 9777860599999998874889897885323-00000027---888756531-------------------112020377
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEV-SMIYSISG---HSSHEYSFI-------------------QNRPFRSPH 57 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~-~~i~s~~g---~~~~~~~~~-------------------~~~p~~~~~ 57 (186)
T Consensus 353 iiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~ 432 (530)
T COG0488 353 IVGPNGAGKSTLLKLLAGELGPLSGTVKVGETVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED 432 (530)
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 98999877899999985213567725995796789998700310276677999998646543289999999984998679
Q ss_pred CCCCHHHCCCCCCC-CCHHHHHHCCCCEEEEEC-HHHCCHHHHHHHHHHHHCCCE
Q ss_conf 52100110234345-682799827998899803-878598899999999971952
Q gi|254781026|r 58 HSVTIAALIGGGLQ-VLPGEDSLAHNGVLFLDE-IPEFSPQTLNALRQPLETGEC 110 (186)
Q Consensus 58 ~~~~~~~l~gg~~~-~~pG~i~lAh~GVLflDE-~~e~~~~~l~~L~~~le~g~v 110 (186)
T Consensus 433 ~~~~v~~LSGGEk~Rl~La~ll~~~pNvLlLDEPTNhLDi~s~eaLe~aL~~f~G 487 (530)
T COG0488 433 QEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDFEG 487 (530)
T ss_pred HCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 6395222587799999999985669978997289876798899999999985898