HHsearch alignment for GI: 254781026 and conserved domain: COG1219

>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].

Probab=98.39  E-value=3.5e-07  Score=62.90  Aligned_cols=105  Identities=22%  Similarity=0.314  Sum_probs=69.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCC--------C
Q ss_conf             97778605999999988748898978853230000002788875653111202037752100110234345--------6
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQ--------V   72 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~--------~   72 (186)
T Consensus       102 LiGPTGsGKTlLAqTLAk~LnVP-F-------aiA--------------------DATtLTEAGYVGEDVENillkLlqa  153 (408)
T COG1219         102 LIGPTGSGKTLLAQTLAKILNVP-F-------AIA--------------------DATTLTEAGYVGEDVENILLKLLQA  153 (408)
T ss_pred             EECCCCCCHHHHHHHHHHHHCCC-E-------EEC--------------------CCCCHHHCCCCCHHHHHHHHHHHHH
T ss_conf             98889975779999999984898-4-------751--------------------4441210663550089999999987


Q ss_pred             CHHHHHHCCCCEEEEECHHHCCH--------------HHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCC
Q ss_conf             82799827998899803878598--------------89999999997195230100307898470156752274
Q gi|254781026|r   73 LPGEDSLAHNGVLFLDEIPEFSP--------------QTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNP  133 (186)
Q Consensus        73 ~pG~i~lAh~GVLflDE~~e~~~--------------~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NP  133 (186)
T Consensus       154 adydV~rAerGIIyIDEIDKIarkSen~SITRDVSGEGVQQALLKiiEGTvasVPPqGGRKHP~Qe~iqvDT~NI  228 (408)
T COG1219         154 ADYDVERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEFIQVDTSNI  228 (408)
T ss_pred             CCCCHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCCE
T ss_conf             645888882885998510254205789872343673589999999970751023999888798420488737634