HHsearch alignment for GI: 254781026 and conserved domain: COG1219
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=98.39 E-value=3.5e-07 Score=62.90 Aligned_cols=105 Identities=22% Similarity=0.314 Sum_probs=69.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCC--------C
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345--------6
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQ--------V 72 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~--------~ 72 (186)
T Consensus 102 LiGPTGsGKTlLAqTLAk~LnVP-F-------aiA--------------------DATtLTEAGYVGEDVENillkLlqa 153 (408)
T COG1219 102 LIGPTGSGKTLLAQTLAKILNVP-F-------AIA--------------------DATTLTEAGYVGEDVENILLKLLQA 153 (408)
T ss_pred EECCCCCCHHHHHHHHHHHHCCC-E-------EEC--------------------CCCCHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98889975779999999984898-4-------751--------------------4441210663550089999999987
Q ss_pred CHHHHHHCCCCEEEEECHHHCCH--------------HHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCC
Q ss_conf 82799827998899803878598--------------89999999997195230100307898470156752274
Q gi|254781026|r 73 LPGEDSLAHNGVLFLDEIPEFSP--------------QTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNP 133 (186)
Q Consensus 73 ~pG~i~lAh~GVLflDE~~e~~~--------------~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NP 133 (186)
T Consensus 154 adydV~rAerGIIyIDEIDKIarkSen~SITRDVSGEGVQQALLKiiEGTvasVPPqGGRKHP~Qe~iqvDT~NI 228 (408)
T COG1219 154 ADYDVERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEFIQVDTSNI 228 (408)
T ss_pred CCCCHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCCE
T ss_conf 645888882885998510254205789872343673589999999970751023999888798420488737634