HHsearch alignment for GI: 254781026 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=95.58  E-value=0.05  Score=32.68  Aligned_cols=77  Identities=32%  Similarity=0.425  Sum_probs=52.2

Q ss_pred             CCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             99889980387859889999999997195230100307898470156752274658878898876438999999998512
Q gi|254781026|r   81 HNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQARI  160 (186)
Q Consensus        81 h~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~rl  160 (186)
T Consensus       291 VpGVLFIDEvHmLDIE~FsFlnrAlEse~a--------------PIii~AtNRG~~kiRGTd----~~sP-------hGI  345 (450)
T COG1224         291 VPGVLFIDEVHMLDIECFSFLNRALESELA--------------PIIILATNRGMTKIRGTD----IESP-------HGI  345 (450)
T ss_pred             ECCEEEEECHHHHHHHHHHHHHHHHHCCCC--------------CEEEEECCCCEEEECCCC----CCCC-------CCC
T ss_conf             134289732134557899999987631467--------------579997177500121667----7688-------889


Q ss_pred             CHHHHHCCCEEEECC-CCCHHHH
Q ss_conf             243210042599838-8566888
Q gi|254781026|r  161 SGPLMDRIDIRIAVP-SRTHIRS  182 (186)
Q Consensus       161 s~plldR~Dl~v~~~-~~~~~~~  182 (186)
T Consensus       346 P~DlLDRllII~t~py~~~Eire  368 (450)
T COG1224         346 PLDLLDRLLIISTRPYSREEIRE  368 (450)
T ss_pred             CHHHHHHEEEEECCCCCHHHHHH
T ss_conf             87666225677447798899999