HHsearch alignment for GI: 254781026 and conserved domain: COG1484

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=96.09  E-value=0.0055  Score=38.28  Aligned_cols=86  Identities=24%  Similarity=0.293  Sum_probs=47.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHH-H
Q ss_conf             977786059999999887488989788532300000027888756531112020377521001102343456827998-2
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDS-L   79 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~-l   79 (186)
T Consensus       110 l~G~~G~GKthLa~Ai~~~l--------~-------~~g---~sv~f~~~~el~-----~~Lk~~~~~-~~~~~~l~~~l  165 (254)
T COG1484         110 LLGPPGVGKTHLAIAIGNEL--------L-------KAG---ISVLFITAPDLL-----SKLKAAFDE-GRLEEKLLREL  165 (254)
T ss_pred             EECCCCCCHHHHHHHHHHHH--------H-------HCC---CEEEEEEHHHHH-----HHHHHHHHC-CCHHHHHHHHH
T ss_conf             98999987999999999999--------9-------839---849998859999-----999998745-52689999887


Q ss_pred             CCCCEEEEECHHH--CCHHHHHHHHHHHHCCCE
Q ss_conf             7998899803878--598899999999971952
Q gi|254781026|r   80 AHNGVLFLDEIPE--FSPQTLNALRQPLETGEC  110 (186)
Q Consensus        80 Ah~GVLflDE~~e--~~~~~l~~L~~~le~g~v  110 (186)
T Consensus       166 ~~~dlLIiDDlG~~~~~~~~~~~~~q~I~~r~~  198 (254)
T COG1484         166 KKVDLLIIDDIGYEPFSQEEADLLFQLISRRYE  198 (254)
T ss_pred             HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             528989982367766881558799999999997