HHsearch alignment for GI: 254781026 and conserved domain: COG3854

>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown].
Probab=96.88  E-value=0.00079  Score=43.22  Aligned_cols=93  Identities=19%  Similarity=0.199  Sum_probs=44.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEE------ECCCC-CCCHHHCCCCCCCCC
Q ss_conf             97778605999999988748898978853230000002788875653111202------03775-210011023434568
Q gi|254781026|r    1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPF------RSPHH-SVTIAALIGGGLQVL   73 (186)
Q Consensus         1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~------~~~~~-~~~~~~l~gg~~~~~   73 (186)
T Consensus       142 iigpP~~GKTTlLRdiaR~~s~g~-------------~~~l~kkv~IiDersEIag~~~gvpq~~~g~R~dVld~c--pk  206 (308)
T COG3854         142 IIGPPQVGKTTLLRDIARLLSDGI-------------NQFLPKKVGIIDERSEIAGCLNGVPQHGRGRRMDVLDPC--PK  206 (308)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCC-------------CCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHCCCC--HH
T ss_conf             965998870779999999863151-------------126773289971500430343588603232210104656--17


Q ss_pred             HH----HHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCE
Q ss_conf             27----99827998899803878598899999999971952
Q gi|254781026|r   74 PG----EDSLAHNGVLFLDEIPEFSPQTLNALRQPLETGEC  110 (186)
Q Consensus        74 pG----~i~lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v  110 (186)
T Consensus       207 ~~gmmmaIrsm~PEViIvDEIGt~--~d~~A~~ta~~~GVk  245 (308)
T COG3854         207 AEGMMMAIRSMSPEVIIVDEIGTE--EDALAILTALHAGVK  245 (308)
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHHHHHCCCE
T ss_conf             888999999549957998343647--779999999854858