HHsearch alignment for GI: 254781026 and conserved domain: COG4178
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].
Probab=93.01 E-value=0.047 Score=32.82 Aligned_cols=101 Identities=24% Similarity=0.261 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCC----------CC--CCHHHCC---
Q ss_conf 77786059999999887488989788532300000027888756531112020377----------52--1001102---
Q gi|254781026|r 2 IGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPH----------HS--VTIAALI--- 66 (186)
Q Consensus 2 ~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~----------~~--~~~~~l~--- 66 (186)
T Consensus 425 ~G~SG~GKTsLlRaiaGLWP~g~G~-------I~~P---~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL 494 (604)
T COG4178 425 TGESGAGKTSLLRALAGLWPWGSGR-------ISMP---ADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVL 494 (604)
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCC-------EECC---CCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 7899987889999996458567874-------4168---98755771488777876589998089997779959999999
Q ss_pred ------------C--CCC--CCCHHH--------HHHCCCCEEEEECHHH-CCHHHHHHHHHHHHC--CCEEE
Q ss_conf ------------3--434--568279--------9827998899803878-598899999999971--95230
Q gi|254781026|r 67 ------------G--GGL--QVLPGE--------DSLAHNGVLFLDEIPE-FSPQTLNALRQPLET--GECII 112 (186)
Q Consensus 67 ------------g--g~~--~~~pG~--------i~lAh~GVLflDE~~e-~~~~~l~~L~~~le~--g~v~i 112 (186)
T Consensus 495 ~~vgL~~L~~rl~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tv 567 (604)
T COG4178 495 HKVGLGDLAERLDEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATV 567 (604)
T ss_pred HHCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 9819198999873327576645852789999999997099989980601125957899999999854899789