HHsearch alignment for GI: 254781026 and conserved domain: COG4930
>COG4930 Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones].
Probab=94.71 E-value=0.031 Score=33.85 Aligned_cols=105 Identities=18% Similarity=0.233 Sum_probs=73.5
Q ss_pred CCCCCHHHCCCCCCCCCHHHHHHCCCCEEEEECHHHC---CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCC
Q ss_conf 7521001102343456827998279988998038785---9889999999997195230100307898470156752274
Q gi|254781026|r 57 HHSVTIAALIGGGLQVLPGEDSLAHNGVLFLDEIPEF---SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNP 133 (186)
Q Consensus 57 ~~~~~~~~l~gg~~~~~pG~i~lAh~GVLflDE~~e~---~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NP 133 (186)
T Consensus 254 GGqttvAnLFYNmatrqiGlvg~w--DvVaFDEVagirFkdkDg~qilKDYMaSG--sf~RG~~~v~~~ASlVFvGNvnq 329 (683)
T COG4930 254 GGQTTVANLFYNMATRQIGLVGLW--DVVAFDEVAGIRFKDKDGMQILKDYMASG--SFERGDKKVVSDASLVFVGNVNQ 329 (683)
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEE--EEEEEHHHCCCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCCCCEEEEEECCCC
T ss_conf 884538999888764456420000--01343011240046800779999987528--70025420236643999832330
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEE
Q ss_conf 658878898876438999999998512243210042599
Q gi|254781026|r 134 CRCGMSNKDENVCIRGPRCATEYQARISGPLMDRIDIRI 172 (186)
Q Consensus 134 cpcG~~~~~~~~c~c~~~~~~~Y~~rls~plldR~Dl~v 172 (186)
T Consensus 330 s~E~lvktshL-~~pfPea------M~DtAFfDR~H~yi 361 (683)
T COG4930 330 SSEGLVKTSHL-TYPFPEA------MRDTAFFDRIHGYI 361 (683)
T ss_pred CCCCEEEHHHC-CCCCCHH------HHHHHHHHHHHCCC
T ss_conf 10010106660-5568255------41457888875437