HHsearch alignment for GI: 254781026 and conserved domain: COG5271
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].
Probab=98.54 E-value=8.7e-07 Score=60.60 Aligned_cols=134 Identities=21% Similarity=0.281 Sum_probs=79.2
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCC--CHHHHH
Q ss_conf 977786059999999887488989788532300000027888756531112020377521001102343456--827998
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQV--LPGEDS 78 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~--~pG~i~ 78 (186)
T Consensus 1548 LEGsPGVGKTSlItaLAr~tG~------------------kliRINLSeQTdL~DLfGsd~Pve-~~Gef~w~dapfL~a 1608 (4600)
T COG5271 1548 LEGSPGVGKTSLITALARKTGK------------------KLIRINLSEQTDLCDLFGSDLPVE-EGGEFRWMDAPFLHA 1608 (4600)
T ss_pred ECCCCCCCHHHHHHHHHHHHCC------------------CEEEEECCCCCHHHHHHCCCCCCC-CCCEEEECCCHHHHH
T ss_conf 2279986678999999997457------------------247863201102898737788755-676167424689998
Q ss_pred HCCCCEEEEECHHHCCHHHHHHHHHHHHCC-CEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 279988998038785988999999999719-5230100307898470156752274658878898876438999999998
Q gi|254781026|r 79 LAHNGVLFLDEIPEFSPQTLNALRQPLETG-ECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQ 157 (186)
Q Consensus 79 lAh~GVLflDE~~e~~~~~l~~L~~~le~g-~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~ 157 (186)
T Consensus 1609 mr~G~WVlLDEiNLaSQSVlEGLNacLDhR~eayIPEld~~f~~HpnfrVFAaqNPq~qggGRK---------------- 1672 (4600)
T COG5271 1609 MRDGGWVLLDEINLASQSVLEGLNACLDHRREAYIPELDKTFDVHPNFRVFAAQNPQDQGGGRK---------------- 1672 (4600)
T ss_pred HHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCHHCCCCCC----------------
T ss_conf 5349879962410327889988899885014425631133252168705542048110279856----------------
Q ss_pred HHCCHHHHHCCCE
Q ss_conf 5122432100425
Q gi|254781026|r 158 ARISGPLMDRIDI 170 (186)
Q Consensus 158 ~rls~plldR~Dl 170 (186)
T Consensus 1673 -gLPkSF~nRFsv 1684 (4600)
T COG5271 1673 -GLPKSFLNRFSV 1684 (4600)
T ss_pred -CCCHHHHHHHHE
T ss_conf -687888622115