HHsearch alignment for GI: 254781026 and conserved domain: KOG0479
>KOG0479 consensus.
Probab=99.90 E-value=3.8e-24 Score=162.41 Aligned_cols=145 Identities=21% Similarity=0.297 Sum_probs=110.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCC--CCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHH
Q ss_conf 97778605999999988748898978853230000002788--8756531112020377521001102343456827998
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHS--SHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDS 78 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~--~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~ 78 (186)
T Consensus 339 lvGDPSvAKSQLLRyVLntAp-------------lAI~TTGRGSSGVGLT----------AAVTtD~eTGERRLEAGAMV 395 (818)
T KOG0479 339 LVGDPSVAKSQLLRYVLNTAP-------------LAIATTGRGSSGVGLT----------AAVTTDQETGERRLEAGAMV 395 (818)
T ss_pred EECCCHHHHHHHHHHHHHCCC-------------CCCCCCCCCCCCCCCE----------EEEEECCCCCHHHHHCCCEE
T ss_conf 846952789999999984154-------------0010368887775514----------67741555313434238368
Q ss_pred HCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 27998899803878598899999999971952301003078984701567522746588788988764389999999985
Q gi|254781026|r 79 LAHNGVLFLDEIPEFSPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCIRGPRCATEYQA 158 (186)
Q Consensus 79 lAh~GVLflDE~~e~~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~c~~~~~~~Y~~ 158 (186)
T Consensus 396 LADRGVVCIDEFDKMsDiDRvAIHEVMEQqtVTIaKAGIHasLNARCSVlAAANPvyG~Yd~~------k~P~eNI---- 465 (818)
T KOG0479 396 LADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHASLNARCSVLAAANPVYGQYDQS------KTPMENI---- 465 (818)
T ss_pred ECCCCEEEEHHCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEECCCCCCCCCCC------CCHHHCC----
T ss_conf 705855873100222430378999998605388671100020235112443137644346777------8856515----
Q ss_pred HCCHHHHHCCCEE-EECCCCC
Q ss_conf 1224321004259-9838856
Q gi|254781026|r 159 RISGPLMDRIDIR-IAVPSRT 178 (186)
Q Consensus 159 rls~plldR~Dl~-v~~~~~~ 178 (186)
T Consensus 466 gLpDSLLSRFDLlFv~lD~~d 486 (818)
T KOG0479 466 GLPDSLLSRFDLLFVVLDDID 486 (818)
T ss_pred CCCHHHHHHHCEEEEEECCCC
T ss_conf 881777754217788721355