HHsearch alignment for GI: 254781026 and conserved domain: KOG0652
>KOG0652 consensus.
Probab=97.59 E-value=9.7e-05 Score=48.58 Aligned_cols=97 Identities=23% Similarity=0.422 Sum_probs=57.5
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 210 mYGPPGTGKTlmARAcAaqT~----------aTFLKLAg-------------------PQLVQMfIGdGAkLVRDAFaLA 260 (424)
T KOG0652 210 MYGPPGTGKTLMARACAAQTN----------ATFLKLAG-------------------PQLVQMFIGDGAKLVRDAFALA 260 (424)
T ss_pred EECCCCCCHHHHHHHHHHHCC----------CHHHHHCC-------------------HHHHHHHHCCHHHHHHHHHHHH
T ss_conf 657999757799999987401----------06887326-------------------4777665334188999999875
Q ss_pred C---CCEEEEECHHHC-----------CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCC
Q ss_conf 9---988998038785-----------98899999999971952301003078984701567522746
Q gi|254781026|r 81 H---NGVLFLDEIPEF-----------SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPC 134 (186)
Q Consensus 81 h---~GVLflDE~~e~-----------~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPc 134 (186)
T Consensus 261 KEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQLD------GFs--s~~~vKviAATNRv 320 (424)
T KOG0652 261 KEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD------GFS--SDDRVKVIAATNRV 320 (424)
T ss_pred HCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC------CCC--CCCCEEEEEECCCC
T ss_conf 3349838997300232334365312343899999999998604------899--75626788521643