HHsearch alignment for GI: 254781026 and conserved domain: KOG0728
>KOG0728 consensus.
Probab=96.66 E-value=0.0031 Score=39.80 Aligned_cols=120 Identities=23% Similarity=0.342 Sum_probs=63.1
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCH-HHHHH
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682-79982
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLP-GEDSL 79 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~p-G~i~l 79 (186)
T Consensus 186 LygppgtGktLlaraVahh----------------t~c~-------f-----irvsgselvqk~igegsrmvrelfvmar 237 (404)
T KOG0728 186 LYGPPGTGKTLLARAVAHH----------------TDCT-------F-----IRVSGSELVQKYIGEGSRMVRELFVMAR 237 (404)
T ss_pred EECCCCCCHHHHHHHHHHH----------------CCEE-------E-----EEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8469997562999998754----------------1407-------9-----9964499999985013899999999987
Q ss_pred CC-CCEEEEECHHHC-----------CHHHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 79-988998038785-----------988999999999719523010030789847015675227465887889887643
Q gi|254781026|r 80 AH-NGVLFLDEIPEF-----------SPQTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKDENVCI 147 (186)
Q Consensus 80 Ah-~GVLflDE~~e~-----------~~~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~~~~c~ 147 (186)
T Consensus 238 ehapsiifmdeidsigs~r~e~~~ggdsevqrtmlellnql------dgfeat--knikvimatnridi----------- 298 (404)
T KOG0728 238 EHAPSIIFMDEIDSIGSSRVESGSGGDSEVQRTMLELLNQL------DGFEAT--KNIKVIMATNRIDI----------- 298 (404)
T ss_pred HCCCCEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC------CCCCCC--CCEEEEEECCCCCC-----------
T ss_conf 50882675000012123434578986389999999999740------240003--66269984164222-----------
Q ss_pred CCHHHHHHHHHHCCHHHH--HCCCEEEECCCCCH
Q ss_conf 899999999851224321--00425998388566
Q gi|254781026|r 148 RGPRCATEYQARISGPLM--DRIDIRIAVPSRTH 179 (186)
Q Consensus 148 c~~~~~~~Y~~rls~pll--dR~Dl~v~~~~~~~ 179 (186)
T Consensus 299 ------------ld~allrpgridrkiefp~p~e 320 (404)
T KOG0728 299 ------------LDPALLRPGRIDRKIEFPPPNE 320 (404)
T ss_pred ------------CCHHHCCCCCCCCCCCCCCCCH
T ss_conf ------------4686638775455564899877