HHsearch alignment for GI: 254781026 and conserved domain: KOG0731
>KOG0731 consensus.
Probab=98.21 E-value=3.6e-06 Score=56.97 Aligned_cols=112 Identities=29% Similarity=0.455 Sum_probs=59.8
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCHHHHHHC
Q ss_conf 97778605999999988748898978853230000002788875653111202037752100110234345682799827
Q gi|254781026|r 1 MIGPPGARKSMLASCLPSILLPLSLEESLEVSMIYSISGHSSHEYSFIQNRPFRSPHHSVTIAALIGGGLQVLPGEDSLA 80 (186)
Q Consensus 1 l~GpPG~GKS~lar~l~~iLP~l~~~e~le~~~i~s~~g~~~~~~~~~~~~p~~~~~~~~~~~~l~gg~~~~~pG~i~lA 80 (186)
T Consensus 349 L~GPPGTGKTLLAKAiAGEA---------------------g--------VPF~svSGSEFvE~~~g~~asrvr~lf~~a 399 (774)
T KOG0731 349 LVGPPGTGKTLLAKAIAGEA---------------------G--------VPFFSVSGSEFVEMFVGVGASRVRDLFPLA 399 (774)
T ss_pred EECCCCCCHHHHHHHHHCCC---------------------C--------CCEEEECHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 87899986789999885305---------------------8--------964641337888876034348889999874
Q ss_pred CC---CEEEEECHHHCCH---------------HHHHHHHHHHHCCCEEEHHCCEEEEECCCEEEEEECCCCCCCCCCCC
Q ss_conf 99---8899803878598---------------89999999997195230100307898470156752274658878898
Q gi|254781026|r 81 HN---GVLFLDEIPEFSP---------------QTLNALRQPLETGECIIARANRKISYPSRIQLIAAMNPCRCGMSNKD 142 (186)
Q Consensus 81 h~---GVLflDE~~e~~~---------------~~l~~L~~~le~g~v~i~R~g~~~~~Pa~f~Lvaa~NPcpcG~~~~~ 142 (186)
T Consensus 400 r~~aP~iifideida~~~~r~G~~~~~~~~e~e~tlnQll~em-Dgf--------~~~--~~vi~~a~tnr~-------- 460 (774)
T KOG0731 400 RKNAPSIIFIDEIDAVGRKRGGKGTGGGQDEREQTLNQLLVEM-DGF--------ETS--KGVIVLAATNRP-------- 460 (774)
T ss_pred HCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCC--------CCC--CCEEEEECCCCC--------
T ss_conf 3269807971454200312556666788807888999887875-277--------677--847998116886--------
Q ss_pred CCCCCCCHHHHHHHHHHCCHHHH--HCCCEEEECC
Q ss_conf 87643899999999851224321--0042599838
Q gi|254781026|r 143 ENVCIRGPRCATEYQARISGPLM--DRIDIRIAVP 175 (186)
Q Consensus 143 ~~~c~c~~~~~~~Y~~rls~pll--dR~Dl~v~~~ 175 (186)
T Consensus 461 d~---------------ld~allrpGRfdr~i~i~ 480 (774)
T KOG0731 461 DI---------------LDPALLRPGRFDRQIQID 480 (774)
T ss_pred CC---------------CCHHHCCCCCCCCCEECC
T ss_conf 64---------------288764987555523246